Pairwise Alignments

Query, 336 a.a., AmmeMemoRadiSam system radical SAM enzyme from Methanococcus maripaludis S2

Subject, 370 a.a., Radical SAM (NCBI) from Rhodospirillum rubrum S1H

 Score =  223 bits (569), Expect = 5e-63
 Identities = 123/325 (37%), Positives = 182/325 (56%), Gaps = 13/325 (4%)

Query: 18  CNLCPKHCVISSGRRGICGGRENIDCKLYAVNYGKICATAVDPIEKKPLFNYKPGTSVFS 77
           C+LCP+HC +  G+RG+C  R NI+  +     G+     VDPIEKKPL ++ PGT V S
Sbjct: 25  CDLCPRHCRLGPGQRGLCFVRANIEGVMVLTGAGRSSGFCVDPIEKKPLAHFLPGTPVLS 84

Query: 78  IATAGCNFRCKHCQNWEISQSLPEDVPFSELTPEDVVDLAKNYLCEGIAYTYTEPTIFYE 137
              AGCN  C  CQNW +S++   D      +P  + DLA    C  +A+TY +P I  E
Sbjct: 85  FGGAGCNLTCAGCQNWRLSRARSMDRLGGTTSPRAIADLALGLGCRSVAFTYNDPVIACE 144

Query: 138 FMQETAKIAKNNDLFNVMVTNGYIEKEPLKKL--SIDAMNIDIKG-NSEFYKKICFAELE 194
            + + A   ++  L  V VT GYI+  P +     +DA N+D+K    + Y+K+  A L 
Sbjct: 145 EVIDVALACRDRGLRTVAVTAGYIDPAPARDFFAVMDAANVDLKAFREDGYRKLTSAHLG 204

Query: 195 PVLETC-ILAKKLGIHVEITNLIVPTYNDNQKDIEFIINFVKDELGVDTPLHFTAFYPHY 253
           PVLET   LA +  + +EIT L++P  ND  +++  ++ FV  +LG + PLHFTAF+P +
Sbjct: 205 PVLETLRFLAGEAAVWLEITTLLIPGRNDGDEELADLVAFVAADLGREVPLHFTAFHPDH 264

Query: 254 KLTSVPSTSIDVIKKARDMALNAGLNYVYAGNVPFSA------GYDTYCPDCKSIVVDRF 307
           +L+++P+T    + +AR++A  AGL +VY GN+P  A      G  T C  C + ++ R 
Sbjct: 265 RLSALPATPAATLLRAREIARAAGLAHVYLGNLPAGALGGAEDGETTLCVGCGAPLIGRR 324

Query: 308 GYQKPKLHLDTSSKTPKCPKCGRKI 332
           GY      LD S     C  CGR +
Sbjct: 325 GYAITGWALDDSG---HCLGCGRAL 346