Pairwise Alignments

Query, 336 a.a., AmmeMemoRadiSam system radical SAM enzyme from Methanococcus maripaludis S2

Subject, 368 a.a., radical SAM domain protein (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score =  252 bits (643), Expect = 1e-71
 Identities = 128/349 (36%), Positives = 196/349 (56%), Gaps = 24/349 (6%)

Query: 2   LKEALFYENLENCKVKCNLCPKHCVISSGRRGICGGRENIDCKLYAVNYGKICATAVDPI 61
           ++ A  ++ L   +V C LC  +C++  GR G CG R N    LY + + ++ A  VDP+
Sbjct: 7   IRRASLWKPLSQQRVHCRLCSHYCIVPEGRSGRCGVRHNKGGTLYTLVHDRVAALHVDPV 66

Query: 62  EKKPLFNYKPGTSVFSIATAGCNFRCKHCQNWEISQSL---------------PEDVPFS 106
           EKKPLF+Y PGT+  S+ T GCNF C  CQNW +S +                P  +P  
Sbjct: 67  EKKPLFHYLPGTATLSLGTVGCNFTCGFCQNWSLSTAAHDDGVSSPTTVTYVPPRSIPGH 126

Query: 107 ELTPEDVVDLAKNYLCEGIAYTYTEPTIFYEFMQETAKIAKNNDLFNVMVTNGYIEKEPL 166
           ++TP+ +V+ A +     IA+TY+EPT+FYE M  TA +A  + L  +MV+NGY  +  L
Sbjct: 127 QVTPQVLVEEAVSCGAASIAFTYSEPTVFYELMAGTADLALASGLGTIMVSNGYQSRRCL 186

Query: 167 KKLS--IDAMNIDIKGNSE-FYKKICFAELEPVLETCILAKKLGIHVEITNLIVPTYNDN 223
           + L   I A NID+K  S+ FY+ +C A L PVL+        G  VE+T L++P  ND+
Sbjct: 187 EALRPRIKAANIDLKAFSDRFYRDVCGARLAPVLDNLKRMVGFGWWVEVTTLVIPGLNDS 246

Query: 224 QKDIEFIINFVKDELGVDTPLHFTAFYPHYKLTSVPSTSIDVIKKARDMALNAGLNYVYA 283
             ++  I  F+ DELG   P H + F+P ++L  +P T ++ +++A  +   +GL++VY 
Sbjct: 247 DDELAAIARFIHDELGAHVPWHISRFHPAHELGHLPPTPLETLERAWKIGRASGLHFVYL 306

Query: 284 GNVPFSAGYDTYCPDCKSIVVDRFGYQKPKLHLDTSSKTPKCPKCGRKI 332
           GN+P      T+CP C ++  +RFGY+            P+CP+CG  I
Sbjct: 307 GNLPGHTSESTFCPGCGTLFAERFGYR------TQLPNGPECPRCGAHI 349