Pairwise Alignments

Query, 330 a.a., 3-isopropylmalate dehydrogenase from Methanococcus maripaludis S2

Subject, 335 a.a., isocitrate dehydrogenase, NAD-dependent (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  266 bits (681), Expect = 4e-76
 Identities = 151/334 (45%), Positives = 202/334 (60%), Gaps = 11/334 (3%)

Query: 4   ICVIEGDGIGKEVVPAAVEVLKATGVEFEFNHALAGDEVFEKTGVALPEETIAAAKAADA 63
           I VI GDGIG  ++ +A+++L   G +FE+  A AG    EK G  LP+ T+   +    
Sbjct: 6   ITVIPGDGIGPSIIDSALKILDKAGCDFEYEFADAGLAALEKQGELLPQRTLELIEKNRI 65

Query: 64  ILFGA----AGETAADVIVKLRKILDTYANIRPVKSYNGINCLKTGIDYIIVRENTEGLY 119
            L G      GE    + V LRK    YAN+RPV S+ G       ID I VRENTEG+Y
Sbjct: 66  TLKGPLTTPVGEGFTSINVTLRKKFGLYANVRPVLSFKGTQARYENIDIITVRENTEGMY 125

Query: 120 KGIEAEIA-DGVTV-ATRVITKDASERIFKHAFEMAKDRKKQGTAGKVTCAHKANVLKIT 177
            G   +++ DG T  AT ++T+  +E+I   A+E+A+   ++    KVT  HKAN++K T
Sbjct: 126 SGHGQKVSEDGSTAEATSIVTRQGAEQIATFAYELARKESRK----KVTIVHKANIMKST 181

Query: 178 DGLFKKTFYEVSNDYKDIQTEDFYVDAMNMFIISRPETFDIVVTSNLFGDILSDGAVGMV 237
            GLF K   EVS  Y DI+TE+  VDA  M ++  PE FD++VT+NLFGDILSD   G+V
Sbjct: 182 SGLFLKVAREVSLRYPDIKTEEMIVDATCMKLVMNPENFDVIVTTNLFGDILSDLCAGLV 241

Query: 238 GGLGMAPSGNVGDKYGLFEPIHGSAPDIAGKGLANPTATILTAVMMLRYLKENEAAEKVE 297
           GGLGMAP  N+G    +FE +HGSAPDIAGK LANPT+ IL ++ ML YL   + A  + 
Sbjct: 242 GGLGMAPGANIGRDAAIFEAVHGSAPDIAGKNLANPTSVILASIQMLEYLGMADKAAPIR 301

Query: 298 KALEEVLSLG-LTTPDLGGTLSTSEMGQEVAKRV 330
           KA+  V+  G  TT DLGGT  T++  Q V  R+
Sbjct: 302 KAVSAVIEEGDRTTRDLGGTHGTTDFTQAVLDRL 335