Pairwise Alignments

Query, 330 a.a., 3-isopropylmalate dehydrogenase from Methanococcus maripaludis S2

Subject, 353 a.a., 3-isopropylmalate dehydrogenase (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

 Score =  184 bits (467), Expect = 3e-51
 Identities = 120/348 (34%), Positives = 179/348 (51%), Gaps = 33/348 (9%)

Query: 3   KICVIEGDGIGKEVVPAAVEVLKAT----GVEFEFNHALAGDEVFEKTGVALPEETIAAA 58
           KI V+ GDGIG E+    V+V+ A     G +  + +A+ G +  +K G   PEET    
Sbjct: 4   KIAVLAGDGIGPEISVQGVDVMSAVCEKFGHKVSYEYAICGADAIDKVGDPFPEETYEVC 63

Query: 59  KAADAILFGAAGETAADV-----------IVKLRKILDTYANIRPVKSYNGINC------ 101
           K ADA+LF A G+   D            ++ +RK L  +ANIRPV+++  +        
Sbjct: 64  KNADAVLFSAVGDPKFDNDPTAKVRPEQGLLAMRKKLGLFANIRPVQTFKCLIHKSPLRA 123

Query: 102 -LKTGIDYIIVRENTEGLYKGIEAEIADGVTVATRVITKDASERIFKHAFEMAKDRKKQG 160
            L    D+I +RE T G+Y G + +  D     T   T+   ERI K AFE A  R+K  
Sbjct: 124 ELVENADFICIRELTGGMYFGEKYQDNDKA-YDTNYYTRPEIERILKVAFEYAMKRRKH- 181

Query: 161 TAGKVTCAHKANVLKITDGLFKKTFYEVSNDYKDIQTEDFYVDAMNMFIISRPETFDIVV 220
               +T   KANVL  +  L+++   E++ +Y ++ T+  +VD   M +I  P  FD++V
Sbjct: 182 ----LTVVDKANVLA-SSRLWRQIAQEMAPNYPEVTTDYMFVDNAAMKMIQEPAFFDVMV 236

Query: 221 TSNLFGDILSDGAVGMVGGLGMAPSGNVGDKYGLFEPIHGSAPDIAGKGLANPTATILTA 280
           T N FGDIL+D    + G +G+ PS + G+   +FEPIHGS P   G  +ANP A IL+ 
Sbjct: 237 TENTFGDILTDEGSVISGSMGLLPSASTGESTPVFEPIHGSWPQAKGLNIANPLAQILSV 296

Query: 281 VMMLRYLKENEAAEKVEKALEEVLSLGLTTPDL----GGTLSTSEMGQ 324
            M+  Y    E    + KA++  L   + TP++    G    T E+GQ
Sbjct: 297 AMLFEYFDCKEEGALIRKAVDASLDENVRTPEIQVADGAKYGTKEVGQ 344