Pairwise Alignments

Query, 356 a.a., DUF123 domain-containing protein from Methanococcus maripaludis S2

Subject, 237 a.a., Endonuclease III/Nth (NCBI) from Rhodospirillum rubrum S1H

 Score =  106 bits (265), Expect = 5e-28
 Identities = 56/168 (33%), Positives = 93/168 (55%), Gaps = 1/168 (0%)

Query: 39  FKILISTVISARTKDETTAKVSKELFKKVKNPKDLVQIPIDELEKLVHPAGFYKTKAKNL 98
           F +L++ V+SA+  D+   + +  LF+    P  +V +  + L   +   G + TKA+N+
Sbjct: 55  FTLLVAVVLSAQATDKGVNRATGPLFQVADTPAKMVALGEEALRGYIRTIGLFNTKARNV 114

Query: 99  KKLGEILIDKYNSNVPNSIEELVTLPGVGRKTANLVMTLAFDDYAICVDTHVHRITNRWY 158
             L + LID++   VP     L TLPGVGRKTAN+V+ +AF    + VDTH+ R+ NR  
Sbjct: 115 IALSQALIDEHGGEVPCDRAALETLPGVGRKTANVVLNIAFGQPTMAVDTHIFRVANRTG 174

Query: 159 YADTESPENTEMDLRKKLPKNYWKKINNLLVVFGQETC-SPIPKCDKC 205
            A  ++P   E+ L   +P+ Y    ++ L++ G+  C +  P+C  C
Sbjct: 175 LAPGKTPLAVEIGLEAVIPEGYRLHAHHWLILHGRYVCKARKPECPLC 222