Pairwise Alignments

Query, 356 a.a., DUF123 domain-containing protein from Methanococcus maripaludis S2

Subject, 232 a.a., endonuclease III from Methanococcus maripaludis JJ

 Score = 58.2 bits (139), Expect = 2e-13
 Identities = 42/145 (28%), Positives = 75/145 (51%), Gaps = 5/145 (3%)

Query: 37  RAFKILISTVISARTKDETTAKVSKELFKKVK-NPKDLVQIPIDELEKLVHPAGFYKTKA 95
           + F+I +  +++  T   +  K  K L   ++  P+++  + I++L++ + P+G+Y  K+
Sbjct: 56  QCFEICVGAILTQNTSWPSVEKSLKNLRNLIEITPENIHNLDIEQLKEAIKPSGYYNQKS 115

Query: 96  KNLKKLGEILIDKYNSNVPNSIEELVTLPGVGRKTANLVMTLAFDDYAICVDTHVHRI-T 154
             LK   E    K N NVP   EEL+ L GVG +TA+ ++  AF   +  VDT+  RI  
Sbjct: 116 IRLKSFSEFFT-KLN-NVPTR-EELLKLNGVGPETADSMLLYAFKVPSFVVDTYTKRILI 172

Query: 155 NRWYYADTESPENTEMDLRKKLPKN 179
           N      +E  +  +    + +PKN
Sbjct: 173 NLNLIEGSEKYDKIKGLFEENIPKN 197