Pairwise Alignments

Query, 360 a.a., mechanosensitive ion channel family protein from Methanococcus maripaludis S2

Subject, 569 a.a., mechanosensitive ion channel protein MscS from Vibrio cholerae E7946 ATCC 55056

 Score =  137 bits (344), Expect = 9e-37
 Identities = 69/200 (34%), Positives = 116/200 (58%)

Query: 142 MIIAFGIVFQMLGLTSKLGTLLVAGGITGIILGFASQTVVANFISGIFLYFDKPLKIGDS 201
           ++   GI+  +  +   L  +L   GI G+I+GFA Q  ++NF +G+ L   +P  +GD 
Sbjct: 352 VVWVIGILVGLSQIGLNLAPVLTGFGIAGVIIGFALQDTLSNFAAGMMLLIYRPFDVGDF 411

Query: 202 VQIGTNSGIVNDIKMMSTRIRTWDGVLVRIPNEKVFNSEIVNNKKYPARRVDIVVGIAYK 261
           V  G   G V+ + +++T IRT+D  ++ +PN K++   I N      RRVD+V GI Y 
Sbjct: 412 VHAGGVDGKVSHMSLVNTTIRTFDNQIIIVPNSKIWGDVIKNVTHERIRRVDMVFGIGYS 471

Query: 262 EDAQRAMDIISKILENMTYVLVEPEFQIFVNDLGNSSVDISVKAWTPSEKWYDVKMELVK 321
           +D  +A  +++ I+++   VL  PE  I V+ L  SS+D  V+ W  ++ ++DV  ++ K
Sbjct: 472 DDLLKAEAVLTDIVKSHPAVLKTPEPNIKVHTLNTSSIDFIVRPWVKTDDYWDVYWDVTK 531

Query: 322 NIKKEFDKEKVEIPFPQRTV 341
            +K  FD+E + IPFPQ+ V
Sbjct: 532 EVKLRFDREGISIPFPQQDV 551