Pairwise Alignments

Query, 360 a.a., mechanosensitive ion channel family protein from Methanococcus maripaludis S2

Subject, 1134 a.a., MscS Mechanosensitive ion channel from Pseudomonas syringae pv. syringae B728a

 Score = 88.6 bits (218), Expect = 8e-22
 Identities = 62/221 (28%), Positives = 109/221 (49%), Gaps = 6/221 (2%)

Query: 135  TVFHYSAMIIAFGIVFQMLGLTSKLGTLLVAGGITGIILGFASQTVVANFISGIFLYFDK 194
            T+  Y+   + F      LG++      LVA    G  LGF  Q + ANFISGI + F++
Sbjct: 875  TLLSYTIAGVGFVTTLSTLGVSWDKLQWLVAALSVG--LGFGMQEIFANFISGIMILFER 932

Query: 195  PLKIGDSVQIGTNSGIVNDIKMMSTRIRTWDGVLVRIPNEKVFNSEIVN-NKKYPARRVD 253
            P++IGD++ IG  SG V+ I++ +T I  +D   + +PN+     +++N +      RV 
Sbjct: 933  PVRIGDTITIGALSGTVSKIRIRATTITDFDRKDIIVPNKTFITGQLINWSLTDTVTRVT 992

Query: 254  IVVGIAYKEDAQRAMDIISKILENMTYVLVEPEFQIFVNDLGNSSVDISVKAWTPS-EKW 312
            + +G+ Y  D      ++ +       VL EPE  ++  + G S++D  ++         
Sbjct: 993  LKLGVDYGSDLDLVRSLLLQAARENPRVLKEPEPIVYFLNFGESTLDHELRMHVRDLGDR 1052

Query: 313  YDVKMELVKNIKKEFDKEKVEIPFPQRTVWF--PQDLKVKI 351
              V  E+ + I +EF K+ + I F Q  ++    Q L+ K+
Sbjct: 1053 NPVLDEINRFINREFKKQHINISFRQMEIYLKNTQGLEYKL 1093