Pairwise Alignments

Query, 360 a.a., mechanosensitive ion channel family protein from Methanococcus maripaludis S2

Subject, 449 a.a., Cyclic nucleotide-binding from Synechococcus elongatus PCC 7942

 Score =  105 bits (262), Expect = 2e-27
 Identities = 66/240 (27%), Positives = 126/240 (52%), Gaps = 6/240 (2%)

Query: 101 LIIYFTYRISNRSKRYLLLKGSQEGKFAEYRLKATVFHYSAMIIAFGIVFQMLGLTSKLG 160
           L++Y   +++   +  +L++   E    E     T +  +++I+  G+  Q +G+   L 
Sbjct: 37  LLLYLMRQMNRWLREIVLVRLGVERGPREAIATITSYLLTSLILIIGL--QAIGVD--LS 92

Query: 161 TLLVAGGITGIILGFASQTVVANFISGIFLYFDKPLKIGDSVQIGTNSGIVNDIKMMSTR 220
           +L V  G+ G+ L    Q + A+F SGI L  ++P+K+GD V +    G V  I   +T 
Sbjct: 93  SLTVLAGVLGLGLSLGLQRLAASFFSGITLLIEQPIKVGDLVSLDGVLGTVEKISFRATA 152

Query: 221 IRTWDGVLVRIPNEKVFNSEIVN-NKKYPARRVDIVVGIAYKEDAQRAMDIISKILENMT 279
           +RT D V V +PN+++ +S I+N + +  A RV + + +AY  D     D +  +    +
Sbjct: 153 VRTLDHVHVIVPNDRLVDSNIINWSYQNTASRVHLPISVAYGTDPLWLTDALLTVARQDS 212

Query: 280 YVLVEPEFQIFVNDLGNSSVDISVKAWTPSEKWYD-VKMELVKNIKKEFDKEKVEIPFPQ 338
            VL +P   ++    G+S+++  +  WT   +  + +K +L   I  EF++ +++IPFPQ
Sbjct: 213 RVLTQPAPTVWFRSFGDSTLNFELLFWTDRPELIEPIKSDLNFRIASEFERREIQIPFPQ 272