Pairwise Alignments

Query, 360 a.a., mechanosensitive ion channel family protein from Methanococcus maripaludis S2

Subject, 773 a.a., MscS Mechanosensitive ion channel (NCBI) from Rhodospirillum rubrum S1H

 Score = 98.6 bits (244), Expect = 5e-25
 Identities = 67/225 (29%), Positives = 112/225 (49%), Gaps = 19/225 (8%)

Query: 132 LKATVFHYSAMIIAFGIVFQMLGLTSKLGTLLVAGGITGIILGFASQTVVANFISGIFLY 191
           L  TV     +++   IV   LG+   +G LL   G+ G+ + F +Q +V + I+G F  
Sbjct: 516 LARTVIMIFLVVVVTLIVLSELGMN--IGPLLAGAGVLGLAISFGAQKLVQDVITGAFCL 573

Query: 192 FDKPLKIGDSVQIGTNSGIVNDIKMMSTRIRTWDGVLVRIPNEKVFNSEIVNNKKYPARR 251
            D  + +GD VQ+  +SG+V  + + S R+R   G +  IP   V   + V N       
Sbjct: 574 IDDAISVGDVVQVAGHSGVVERLSIRSLRLRDESGSVHTIPFSSV---DTVTNLTKDFSF 630

Query: 252 VDIVVGIAYKEDAQRAMDIISKILENMTYVLVEPEFQ---------IFVNDLGNSSVDIS 302
             + +G+AY+ED      +++K+ E +     +PE+          + V+  G SSV+I 
Sbjct: 631 YVMTIGVAYREDTDAVCALLTKVDEALR---AKPEYAAEILAPLEILGVDSFGASSVNIK 687

Query: 303 VKAWT-PSEKWYDVKMELVKNIKKEFDKEKVEIPFPQRTVWFPQD 346
            +  T P ++W+ V  E  + +K+ FD   +EIPFP  TV+F  D
Sbjct: 688 ARIKTRPIKQWF-VGREFNRMMKQAFDAAGIEIPFPHTTVYFGTD 731



 Score = 24.6 bits (52), Expect = 0.009
 Identities = 28/93 (30%), Positives = 45/93 (48%), Gaps = 7/93 (7%)

Query: 54  WILNEETAGLISTFVLAIFVVLALNVIESFVTYQLFGFDLKILTYSLLIIYFTYRISNRS 113
           WI        +  FV+    VL L V    +T +LFG  L +L  ++++I  + +    +
Sbjct: 269 WIRRMTNLAALGVFVVGTLEVLGLPVGTRELTAKLFG--LVMLGLAVVLILQSRKTVAST 326

Query: 114 KRYLLL---KGSQEGKFAEYRLKATVFHYSAMI 143
            R  +L   KGS+  K A  RL A V+H  A++
Sbjct: 327 IRLRILGLGKGSRTAK-ALGRL-AEVWHVLALV 357