Pairwise Alignments

Query, 360 a.a., mechanosensitive ion channel family protein from Methanococcus maripaludis S2

Subject, 274 a.a., MscS mechanosensitive ion channel (RefSeq) from Shewanella loihica PV-4

 Score =  131 bits (329), Expect = 2e-35
 Identities = 54/202 (26%), Positives = 116/202 (57%)

Query: 141 AMIIAFGIVFQMLGLTSKLGTLLVAGGITGIILGFASQTVVANFISGIFLYFDKPLKIGD 200
           A++  F ++  +  +  +  +L+   G  G+ +G A Q  ++NF SG+ +   +P ++GD
Sbjct: 66  ALVFVFTVIATLGQIGVQTASLVAVIGAAGLAVGLALQGSLSNFASGVLMVLFRPCRVGD 125

Query: 201 SVQIGTNSGIVNDIKMMSTRIRTWDGVLVRIPNEKVFNSEIVNNKKYPARRVDIVVGIAY 260
            ++    +G V++I + ST++RT D  ++  PN  + N  I N      RR+D+V+G++Y
Sbjct: 126 YIEAAGIAGTVDEITIFSTKLRTPDNKVIVAPNSSIMNGTITNYSAMETRRIDLVIGVSY 185

Query: 261 KEDAQRAMDIISKILENMTYVLVEPEFQIFVNDLGNSSVDISVKAWTPSEKWYDVKMELV 320
             D ++  +++ ++L+N  Y+L +P + + + +L +SSV+  V+ W     ++  + E++
Sbjct: 186 DADLKQTKEVLKQVLDNNAYILKDPAYTVALTELADSSVNFVVRPWVKGSDYWPARFEIL 245

Query: 321 KNIKKEFDKEKVEIPFPQRTVW 342
           + IK   D+  + IP+PQ  ++
Sbjct: 246 EQIKLALDENNIGIPYPQMDIY 267