Pairwise Alignments

Query, 360 a.a., mechanosensitive ion channel family protein from Methanococcus maripaludis S2

Subject, 275 a.a., hypothetical Small-conductance mechanosensitive channel (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  129 bits (323), Expect = 1e-34
 Identities = 59/205 (28%), Positives = 116/205 (56%)

Query: 141 AMIIAFGIVFQMLGLTSKLGTLLVAGGITGIILGFASQTVVANFISGIFLYFDKPLKIGD 200
           A++  F I+  +  +  +  +L+   G  G+ +G A Q  ++NF SG+ +   +P ++GD
Sbjct: 66  AVVFVFTIIATLGQIGVQTASLVAVIGAAGLAVGLALQGSLSNFASGVLMVLFRPCRVGD 125

Query: 201 SVQIGTNSGIVNDIKMMSTRIRTWDGVLVRIPNEKVFNSEIVNNKKYPARRVDIVVGIAY 260
            ++    +G V++I + ST++RT D  ++  PN  + N  I N      RR+D+V+ ++Y
Sbjct: 126 YIEAAGIAGTVDEITIFSTKLRTPDNKVIVAPNSSIMNGTITNYSASENRRIDLVICVSY 185

Query: 261 KEDAQRAMDIISKILENMTYVLVEPEFQIFVNDLGNSSVDISVKAWTPSEKWYDVKMELV 320
             D  +   ++++IL+N  YVL EP + + +++L +SS++  V+ W  +  ++  + E++
Sbjct: 186 SADLAQTKKVLTEILDNNQYVLKEPGYTVGLSELASSSINFVVRPWVKTADYWTARFEIL 245

Query: 321 KNIKKEFDKEKVEIPFPQRTVWFPQ 345
           + IK   D   +EIPFPQ  +   Q
Sbjct: 246 EQIKNALDAADIEIPFPQMDIHVKQ 270