Pairwise Alignments

Query, 360 a.a., mechanosensitive ion channel family protein from Methanococcus maripaludis S2

Subject, 460 a.a., MscS Mechanosensitive ion channel (RefSeq) from Dinoroseobacter shibae DFL-12

 Score =  109 bits (273), Expect = 1e-28
 Identities = 68/244 (27%), Positives = 122/244 (50%), Gaps = 4/244 (1%)

Query: 108 RISNRSKRYLLLKGSQEGKFAEYRLKATVFHYSAMIIAFGIVFQMLGLTSKLGTLLVAGG 167
           R+  R  R++L +G     F    L A +      +I   +V Q+ GLT    +L+   G
Sbjct: 161 RLVGRLARWML-RGRVRSPFLGDVL-ARLIALPVFLIGVYVVLQVAGLTQLALSLIGGAG 218

Query: 168 ITGIILGFASQTVVANFISGIFLYFDKPLKIGDSVQIGTNSGIVNDIKMMSTRIRTWDGV 227
           I GI++GFA + +  NF++ + L   +P    D V++G + G+V+ +   ST + + +G 
Sbjct: 219 IVGIVIGFAFRDIAENFLASLLLSIRQPFHRNDVVRVGEHLGVVHSMNTRSTVLVSPEGN 278

Query: 228 LVRIPNEKVFNSEIVNNKKYPARRVDIVVGIAYKEDAQRAMDIISKILENMTYVLVEPEF 287
            ++IPN +VF + I N     +RR    VG+ Y        DII ++L     V+ +PE 
Sbjct: 279 HIQIPNAQVFKTTIENYTTSASRRETFTVGVGYDVPISEVQDIILEVLRGHEAVVQDPEP 338

Query: 288 QIFVNDLGNSSVDISVKAWTPSEKWYDVKME--LVKNIKKEFDKEKVEIPFPQRTVWFPQ 345
            +  + LG ++V++ V  W    +   +K+   L++ +K+   +  V +P   R V FPQ
Sbjct: 339 MVLADSLGAATVNVMVYFWFDGARVSPIKLRSALIRRVKQALTEAGVSMPDEAREVIFPQ 398

Query: 346 DLKV 349
            + +
Sbjct: 399 GIPI 402