Pairwise Alignments

Query, 360 a.a., mechanosensitive ion channel family protein from Methanococcus maripaludis S2

Subject, 1067 a.a., MscS mechanosensitive ion channel (RefSeq) from Shewanella sp. ANA-3

 Score = 94.0 bits (232), Expect = 2e-23
 Identities = 62/211 (29%), Positives = 109/211 (51%), Gaps = 8/211 (3%)

Query: 135  TVFHYSAMIIAFGIVFQMLGLT-SKLGTLLVAGGITGIILGFASQTVVANFISGIFLYFD 193
            TV  Y  + +   I F  LG+  SKL  L+ A     + LGF  Q + ANFISG+ + F+
Sbjct: 845  TVSRYLVVFLGLLIGFSNLGMEWSKLQWLIAA---LSLGLGFGLQEIFANFISGLIILFE 901

Query: 194  KPLKIGDSVQIGTNSGIVNDIKMMSTRIRTWDGVLVRIPNEKVFNSEIVN-NKKYPARRV 252
            KP++IGD+V I   +G V+ I++ +T I  WD   + IPN+     +++N +   P  RV
Sbjct: 902  KPVRIGDTVTIRDLTGTVSKIQIRATTIIDWDRKEIIIPNKAFITEQLINWSLSDPITRV 961

Query: 253  DIVVGIAYKEDAQRAMDIISKILENMTYVLVEPEFQIFVNDLGNSSVDISVKAWTP--SE 310
             + V +A   D  +    + + ++     L  PE +++    G  + D  V+A+    S 
Sbjct: 962  IVHVSVARDSDPAKVEATLYQAVQECEDALPNPEPEVWFAGFGKHTQDYEVRAYAKEMSA 1021

Query: 311  KWYDVKMELVKNIKKEFDKEKVEIPFPQRTV 341
            +W  ++ +L K I ++  +  +E+ +PQ  +
Sbjct: 1022 RW-PLRHDLHKRITRKLKENNLELAYPQMEI 1051