Pairwise Alignments

Query, 552 a.a., sulfate permease from Methanococcus maripaludis S2

Subject, 588 a.a., sulfate permease family protein (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  363 bits (932), Expect = e-104
 Identities = 197/528 (37%), Positives = 327/528 (61%), Gaps = 31/528 (5%)

Query: 3   INNNLNYENLKNDLFAGFTIAIVALPLAMAFAIASGVSPEKGLFTAIIAGFLISVFGGSK 62
           + +  +++    DL AG T+ I+A+PLAMA AIASGV P+ GL+TAI+ GF+I++ GGS+
Sbjct: 25  VKDRYSFKRFGQDLLAGLTVGIIAIPLAMALAIASGVPPQYGLYTAIVGGFIIAMTGGSR 84

Query: 63  YQIGGPTGAFVVILYGIIASYGYEGLVIATLMAGVILIIMGLLKLGNIIKFIPYPVTMGF 122
           Y + GPT AFVV+LY I   +G  GL+IAT+M+G++L+ M +L+LG +I +IP  VT+GF
Sbjct: 85  YSVSGPTAAFVVLLYPIAQQFGLAGLLIATVMSGMMLVAMAMLRLGRLILYIPESVTLGF 144

Query: 123 TSGIALIIFSTQVKDFFGLSITNVPATFLGQWITYATNIQLLNPYALLISILSLVILTKS 182
           T+GI ++I + Q+KDFFGL I ++P  +  + +     +  L+  +L I+  +L  +   
Sbjct: 145 TAGIGVVIATLQLKDFFGLQIEHMPEQYFAKLMALGQALPSLHLPSLFIAAATLATMLLW 204

Query: 183 KKVFSKIPSPIIAIIVGIVLVYAFN---LPVETIESKF------GQIPNSIP-------F 226
            ++   +P+ + AI +G +L    N     +ETI ++F      G I + IP       +
Sbjct: 205 PRLKIPVPAHLPAIALGSILALILNAMGAEIETIGTRFHYQLTDGGIGSGIPAVLPHFEW 264

Query: 227 PSLP--------ELNFQKMELLFPSALSIAFLGAIESLMCAVVADGMTGYKHNSNKELIG 278
           P L         E N    + L P+A +IA LGAIESL+CAVV DGMTG +H++N EL+G
Sbjct: 265 PWLQTGPNGQAFEFNLAAFQALLPAAFAIAMLGAIESLLCAVVLDGMTGKRHSANSELLG 324

Query: 279 QGIANIGSVLFGGIPATGALARTATNIKAGATSRLSGIIHSVMLFLFMLLLSPLILKIPL 338
           QGI NI +  FGGIPAT A+AR+A N+KAGA S ++ +IH++++ + ++ L+ ++  +P+
Sbjct: 325 QGIGNIIAPFFGGIPATAAIARSAANVKAGAQSPIASMIHALVVLIGLVALAGILAYLPM 384

Query: 339 ATLSAILVVVAWNMAEVKHFKSILFKSPKRDRIVLLVTFLLTIFVNLNTAIQIGMLLAVI 398
           + ++A+L+VVAWNM+E      +L  +P  D +V L  F LT+  ++  AI +G++LA +
Sbjct: 385 SAMAALLLVVAWNMSEAPKAVHLLKTAPTSDILVFLSCFSLTVIFDMVIAISVGIILAAL 444

Query: 399 VFMQRLIEVSEISNLKTVPQEEDPDSITLKDVPPCIEVYEINGPFFFGIADKFKSTLNVV 458
           +FM+ + E++++ ++ +  +  D      + +P    V +INGP FF  AD+  + +  +
Sbjct: 445 LFMKEIAEMTKLYDISSNKRYVD------QSLPADWAVLKINGPLFFAAADRIFAEIASL 498

Query: 459 AKRKPSAIILRMRNVPIIDSTGIKNLEEFIESSKIQNISLIISGADYK 506
            + K   I+L +  V I+D+ G+  L + IE  K+    L+I+   ++
Sbjct: 499 TQDK-QVIVLYLDGVSILDAGGLAALSKLIEKCKLNQTKLLITDLQFQ 545