Pairwise Alignments

Query, 234 a.a., ABC transporter ATP-binding protein from Methanococcus maripaludis S2

Subject, 230 a.a., putative macrolide efflux ABC transporter, ATP-binding protein (RefSeq) from Shewanella amazonensis SB2B

 Score =  216 bits (551), Expect = 2e-61
 Identities = 109/229 (47%), Positives = 164/229 (71%), Gaps = 2/229 (0%)

Query: 4   IISLEDVWKIYQMGEVEVQALKGVSLDVNKGDFVAIVGSSGSGKSTMMNMIGCLDVPTKG 63
           +ISL+ + K ++MG+ EVQAL+GV + + + +FVAI+G SGSGKST+MN+IGCLD PT G
Sbjct: 1   MISLQALTKSFRMGDAEVQALRGVDIHIRQNEFVAIMGPSGSGKSTLMNIIGCLDRPTSG 60

Query: 64  EVYLKSKNISNMNESELSELRGKTIGFVFQQYNLIPNMTALENVLLPLQIQEVNDSTAER 123
              L    +  +++  LS +R + IGFVFQ ++L+P ++AL+NVLLPL+  E      + 
Sbjct: 61  NYLLNGSAVGGLSDDALSAVRNREIGFVFQSFHLLPRLSALDNVLLPLRFSETPRGDRQH 120

Query: 124 SAERALKQVGLEDRMNNKPSQLSGGQQQRVSIARALACDPEIILADEPTGALDSATGKEI 183
           + E  L++VGL  R++++P+QLSGGQ+QRV+IARAL   P ++LADEPTGALDS T  EI
Sbjct: 121 AIE-LLERVGLGQRLDHRPNQLSGGQRQRVAIARALVNRPTLLLADEPTGALDSKTSVEI 179

Query: 184 INLFTALWESGKTIIMITHDQKLAKYAKTIVELKDGKIINIIDNKPNAV 232
           + LF  L  SG+TI+++TH++++A+ A  I+ ++DG ++     KP  V
Sbjct: 180 MALFDELHLSGQTIVLVTHEEEVAECAGRIIRMRDG-VVQQDKQKPREV 227