Pairwise Alignments

Query, 234 a.a., ABC transporter ATP-binding protein from Methanococcus maripaludis S2

Subject, 656 a.a., ABC transporter, ATP-binding/permease protein (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  203 bits (516), Expect = 8e-57
 Identities = 101/227 (44%), Positives = 160/227 (70%), Gaps = 3/227 (1%)

Query: 4   IISLEDVWKIYQMGEVEVQALKGVSLDVNKGDFVAIVGSSGSGKSTMMNMIGCLDVPTKG 63
           ++ +   ++ +Q GE ++  LK ++L + +G+ VAIVG+SGSGKST+MN++GCLD P+KG
Sbjct: 5   LLEVSACYRSFQAGEQQLTVLKDINLSIARGEMVAIVGASGSGKSTLMNILGCLDKPSKG 64

Query: 64  EVYLKSKNISNMNESELSELRGKTIGFVFQQYNLIPNMTALENVLLPLQIQEVNDSTAER 123
             ++  ++ S M+  EL++LR +  GF+FQ+Y+L+ ++ A+ NV +P      +      
Sbjct: 65  AYFIDGQDTSQMDVDELAKLRREHFGFIFQRYHLLGDLNAVGNVEVPAVYAGKDRLERRD 124

Query: 124 SAERALKQVGLEDRMNNKPSQLSGGQQQRVSIARALACDPEIILADEPTGALDSATGKEI 183
            AE  L ++GL +R+++KP+QLSGGQQQRVS+ARAL    ++ILADEPTGALDS +G+E+
Sbjct: 125 RAESLLSRLGLGERLDHKPNQLSGGQQQRVSVARALMNGGDVILADEPTGALDSHSGEEM 184

Query: 184 INLFTALWESGKTIIMITHDQKLAKYAKTIVELKDGKIINIIDNKPN 230
           + L   L   G TII++THD  +A++A  I+E+KDG II+   ++PN
Sbjct: 185 MRLLQELHREGHTIIIVTHDMHVAQHADRIIEIKDGVIIS---DEPN 228