Pairwise Alignments

Query, 234 a.a., ABC transporter ATP-binding protein from Methanococcus maripaludis S2

Subject, 218 a.a., lipoprotein releasing system ATP-binding protein (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

 Score =  182 bits (463), Expect = 3e-51
 Identities = 97/219 (44%), Positives = 142/219 (64%), Gaps = 5/219 (2%)

Query: 4   IISLEDVWKIYQMGEVEVQALKGVSLDVNKGDFVAIVGSSGSGKSTMMNMIGCLDVPTKG 63
           +I LE + K +      +Q LKG+ L++NKG+ V+IVG SG+GK+T++ ++G LD P  G
Sbjct: 1   MIKLEGITKSFG----SLQVLKGIDLEINKGEIVSIVGPSGAGKTTLLQIMGTLDEPDAG 56

Query: 64  EVYLKSKNISNMNESELSELRGKTIGFVFQQYNLIPNMTALENVLLPLQIQEVNDSTAER 123
            V +    +S M E ELS  R K IGFVFQ + L+P  TALENV++P  I  V+   A  
Sbjct: 57  TVAIDGTVVSRMKEKELSAFRNKNIGFVFQFHQLLPEFTALENVMIPAFIAGVSSKEANE 116

Query: 124 SAERALKQVGLEDRMNNKPSQLSGGQQQRVSIARALACDPEIILADEPTGALDSATGKEI 183
            A   L  +GL DR ++KP++LSGG++QRV++ARAL   P +ILADEP+G+LD+   +++
Sbjct: 117 RAMEILAFMGLTDRASHKPNELSGGEKQRVAVARALINHPAVILADEPSGSLDTHNKEDL 176

Query: 184 INLFTALWES-GKTIIMITHDQKLAKYAKTIVELKDGKI 221
             LF  L +  G+T +++THD+ LAK     V + DG I
Sbjct: 177 HQLFFDLRDRLGQTFVIVTHDEGLAKITDRTVHMVDGTI 215