Pairwise Alignments

Query, 438 a.a., COG1361 S-layer family protein from Methanococcus maripaludis S2

Subject, 523 a.a., COG1361 S-layer family protein from Methanococcus maripaludis JJ

 Score = 72.8 bits (177), Expect = 2e-17
 Identities = 83/321 (25%), Positives = 137/321 (42%), Gaps = 42/321 (13%)

Query: 37  LNINKVNQDPDPAIAGDVFDLRVSIENDGGNGE--GDFIVEVEPSYPFE--EIEGEDLIQ 92
           L I++   +P+    GD  D+ + + ND G+ E   D  + VE +YPFE  ++     + 
Sbjct: 24  LEIDEPQYNPNVIHPGDDVDVWIDVANDEGSDEIIEDLRISVESNYPFEVKQVNPTKGVY 83

Query: 93  DIGIINGYEDGNDAIIAKFKLRVSEDATEGDYPIEVH-----IYKKGED---ASSGYTKE 144
           +I  +N  E       A FKL +++DA+  DY ++V      +   G+D    S  YTK 
Sbjct: 84  EISQLNEGESDT----AYFKLHINDDASSRDYRLDVTVSYDIVEYDGDDRQVISKSYTKI 139

Query: 145 ITVTVGNEESAEVSLDADELVAGDKTNVTFTIENTGSAPIKNLEFSWESENNAILPLGSG 204
             + V    + E++ D   L      NV   + N G+   K    +  S N+ I P+ + 
Sbjct: 140 YYIPVYGLANFEINSDGVTLTPAKTENVQIKVTNKGTGTAKEATLTIGS-NDLINPIDT- 197

Query: 205 NLKTISYIGVGSSVDVT----YTVLASTDVDPGIYELTMDLTYDDSLNNTKEEVEHLAGI 260
              T  Y+G   S D+T      + AS D   G Y +   L++ DS      EV ++ G 
Sbjct: 198 ---TKFYLG-SLSPDITKLLSLNLHASGDATEGSYLIPATLSWIDSDGTENSEVINI-GF 252

Query: 261 LVLGKTDFEVSYSGEDSGE---------YTLTVMNVGKSDVNSVIVSI----PEQDAWSV 307
           +V G  +  +S    D  E           + + N G  +  ++ + +    P +D+WS 
Sbjct: 253 IVEGDINLGISNVITDPTEIKAQETYVKIDVDLTNNGHGEAKNIEIDLLSEYPFKDSWSN 312

Query: 308 SGVSTSIIGNLDGGDYTFSNF 328
           S      IG L  GD   + F
Sbjct: 313 SNFKN--IGTLTSGDTKTATF 331



 Score = 53.9 bits (128), Expect = 1e-11
 Identities = 73/313 (23%), Positives = 117/313 (37%), Gaps = 33/313 (10%)

Query: 85  IEGEDLIQDIGIINGYEDGNDAIIAKF---KLRVSEDATEGDYPIEVHIY-------KKG 134
           I   DLI  I     Y       I K     L  S DATEG Y I   +        +  
Sbjct: 186 IGSNDLINPIDTTKFYLGSLSPDITKLLSLNLHASGDATEGSYLIPATLSWIDSDGTENS 245

Query: 135 EDASSGYTKEITVTVGNEESAEVSLDADELVAGDK-TNVTFTIENTGSAPIKNLEFSWES 193
           E  + G+  E  + +G    + V  D  E+ A +    +   + N G    KN+E    S
Sbjct: 246 EVINIGFIVEGDINLG---ISNVITDPTEIKAQETYVKIDVDLTNNGHGEAKNIEIDLLS 302

Query: 194 ENNAILPLGSGNLKTISYIGVGSSVDVTYTVLASTDVDPGIYELTMDLTYDDSLNNTKEE 253
           E        + N K I  +  G +   T+ +    D +   Y + +++TY D  +    E
Sbjct: 303 EYPFKDSWSNSNFKNIGTLTSGDTKTATFYIDVDKDAEAKHYSVPLNITYMDIFDEEHSE 362

Query: 254 VEHLAGILVLGKTDFEV-----SYSGEDSGEYTLTVMNVGKSDVNSVIVSIPEQDAWSVS 308
           +E++  + +  K   E+     +    D    TLT+ N G     SV ++  +  A    
Sbjct: 363 MEYI-DLYIKPKPVLEILPETYTLKAGDENTITLTLQNTGSEKAQSVKITAIKNTAQPFE 421

Query: 309 GV-STSIIGNLD----GGDYTFSNFELSTTQSDSPLIVEITYT--SPEGD------RVTI 355
               T  IG LD    G      + +      +  + VE+     S EGD      + TI
Sbjct: 422 YTQKTDSIGTLDTNETGEGQLIIDVDSDAANKEYLITVEVRSVGDSEEGDDNVYISQKTI 481

Query: 356 QKEVEMPSETTVM 368
           +  VE  S +T++
Sbjct: 482 RVNVEGGSNSTLV 494