Pairwise Alignments

Query, 438 a.a., COG1361 S-layer family protein from Methanococcus maripaludis S2

Subject, 419 a.a., COG1361 S-layer family protein from Methanococcus maripaludis JJ

 Score =  357 bits (917), Expect = e-103
 Identities = 179/436 (41%), Positives = 287/436 (65%), Gaps = 28/436 (6%)

Query: 4   KSLKIGSIMLIMLFSIMGNYAYTFYEDVDDYVILNINKVNQDPDPAIAGDVFDLRVSIEN 63
           K + I SI L+ML S+     Y     + D  +++IN VNQDP PA+ GD+F++R+ ++N
Sbjct: 4   KKIIISSITLLMLLSVAMAPVYA-ETSISDISLVSINLVNQDPTPAVGGDIFEVRIGVKN 62

Query: 64  DGGNGEGDFIVEVEPSYPFEEIEGEDLIQDIGIINGYEDGN-DAIIAKFKLRVSEDATEG 122
           +GG   GD+I+E++PSYPF+++ GE+L ++IG ++ Y+D + + II  FKLRV+E+ T G
Sbjct: 63  EGGKSAGDYILELDPSYPFQKVAGEELSKEIGFLDKYQDDDKEIIITAFKLRVNEEVTSG 122

Query: 123 DYPIEVHIYKKGEDASSGYTKEITVTVGNEESAEVSLDADELVAGDKTNVTFTIENTGSA 182
           +YP++V +YKKG+   +GY  E+TV VGN+E+AEV L   EL  G+ + +TFTI+N GSA
Sbjct: 123 NYPLKVLLYKKGDLTKTGYKTELTVDVGNKENAEVMLSTSELNPGENSKLTFTIKNAGSA 182

Query: 183 PIKNLEFSWESENNAILPLGSGNLKTISYIGVGSSVDVTYTVLASTDVDPGIYELTMDLT 242
           P+K+L FSW++  N ILPLGSGN + + YIGV  +V++ Y V+A +D++PG+Y++ M L 
Sbjct: 183 PLKDLTFSWDTPENKILPLGSGNTRFVKYIGVNQAVNLDYDVMAGSDIEPGLYKINMYLN 242

Query: 243 YDDSLNNTKEEVEHLAGILVLGKTDFEVSYSGEDSGEYTLTVMNVGKSDVNSVIVSIPEQ 302
           Y+D++N++++ +   AGI +L K DFE+++S      YT ++MNVG SD  SV + IP+Q
Sbjct: 243 YEDTINSSEKNIIQDAGIHILEKADFEIAFSENLDDSYTFSIMNVGNSDTKSVSMYIPKQ 302

Query: 303 DAWSVSGVSTSIIGNLDGGDYTFSNFEL---STTQSDSPLIVEITYTSPEGDRVTIQKEV 359
           D W++ G + +IIGNLD GDYT+++F L   S+ QS+ P+ VE  YTS EG+R  ++KE+
Sbjct: 303 DGWTIIGSNNAIIGNLDAGDYTYASFNLLADSSNQSEIPIKVEAYYTSNEGNRKVVEKEI 362

Query: 360 EMPSETTVMSMSSDDSSAPQDFASGPGGNRNPLSTIQNSITSAIPYVIGGLVALAAIAVF 419
            + +    ++  +          SG GG    L             ++ G+V +A + + 
Sbjct: 363 LVSNSNAALTYINQAD-------SGKGGFTGYL-------------IMAGIVIIAILILG 402

Query: 420 VY---RIIKRKKLAKQ 432
           ++   +I+K+ K AK+
Sbjct: 403 IFIIRKILKKIKSAKK 418