Pairwise Alignments

Query, 415 a.a., ABC transporter permease from Methanococcus maripaludis S2

Subject, 376 a.a., Lipoprotein releasing system transmembrane protein LolC from Pseudomonas fluorescens FW300-N2E2

 Score = 60.5 bits (145), Expect = 8e-14
 Identities = 38/152 (25%), Positives = 74/152 (48%), Gaps = 14/152 (9%)

Query: 278 QIISMLTTFLSFIAGISLIVGVTGISNTMFTTVLEKTREIGIMKAIGAKNKDIMLLFVFN 337
           Q I M    +  +  + + V    I +T+   V +K  +I I++ +GA    IM +F+  
Sbjct: 225 QAIRMEKAMIGLLLLLIVAVAAFNIISTLVMVVNDKKGDIAILRTLGATPGQIMRIFMVQ 284

Query: 338 SAIIGLVGGFLGLVLGTILSQIIVWFIA--------QSMDSSYQFV------LSIKSVVI 383
             +IG++G F+G ++G   +  +   IA        + +++   F+      L +  V++
Sbjct: 285 GTVIGVIGTFVGALVGMFAALNVSAAIAALEGLIGHKFLNADVYFIDYLPSQLQVDDVLM 344

Query: 384 AIGCSLAAGIIAGIIPAYNASKLKPVEALRSE 415
             G +L    +A + PA+ A++ +P EALR E
Sbjct: 345 VCGAALVLSFLATLYPAWRAARTQPAEALRYE 376