Pairwise Alignments

Query, 415 a.a., ABC transporter permease from Methanococcus maripaludis S2

Subject, 647 a.a., transmembrane ATP-binding ABC transporter protein from Sinorhizobium meliloti 1021

 Score =  127 bits (318), Expect = 1e-33
 Identities = 102/417 (24%), Positives = 195/417 (46%), Gaps = 38/417 (9%)

Query: 9   MASKMVKSSKLRSWITILGIVIGIASVIAIISAGDYLSTSVSDQLNDMLSDEITLTASAA 68
           MA + ++++  R+ +T+LGIVIG+ SV+A+++ G     SV D+++ M SD + +  S A
Sbjct: 259 MALRALRANLFRTILTLLGIVIGVGSVVAMLAIGTGAQNSVLDRISSMGSDLLVVRPSMA 318

Query: 69  --QGSDDDEDPELTDMDVLILNGISDIEYVDVRVSTRNEVRFAGGRETATITGVDPAVWS 126
             +GS    +  L   D   +  ++++ +    +++   +R        T  G  P  ++
Sbjct: 319 NFRGSAGGTNVTLVPADADAITELANVAFAVPEMTSTVTLRRGNIDYQTTANGTVPQ-FT 377

Query: 127 QMTDEELSAGRLLQASDSN-----AVIISYYTATEAFDREIGINQMITIGNKQFKVVGIL 181
           +    ++  G  +  +D       AV+      T   +    I Q + +    F+V+G+ 
Sbjct: 378 EAKSWKIGRGEFINRNDMETYAPVAVLGETVVKTLFPEGSDPIGQYVLVNKIPFQVIGV- 436

Query: 182 EEDETQGFGQMGGMSSNTVYMPYEAVYTLELDDDASYSISEKEEGVYDEIIFTLYEDVNQ 241
                     M GM ++      + V  + L   +     ++        I T+   V  
Sbjct: 437 ----------MSGMGASAGGNDQDDVVLVPLTTGSMRLFGQRN-------IRTITVKVQD 479

Query: 242 TTALENIQKK---LMMSRHVNEDNMDFTIRSPTVFEGPEQIISMLTTFLSFIAGISLIVG 298
            +A++  Q++   L+  RH  +D     + S  V E   +  + +  FL  +A ISL+VG
Sbjct: 480 ASAIDLTQERIQALLNERHRKDDTQITNMSS--VREAFTETSNTMKFFLGSVAAISLLVG 537

Query: 299 VTGISNTMFTTVLEKTREIGIMKAIGAKNKDIMLLFVFNSAIIGLVGGFLGLVLGTILSQ 358
             G+ N M  +V E+TREIG+  A GA+ +DI++ F+  + ++  +GG +G+V G     
Sbjct: 538 GIGVMNIMLVSVSERTREIGVRMATGARERDILVQFIVEALVVSAIGGAIGVVAG----- 592

Query: 359 IIVWFIAQSMDSSYQFVLSIKSVVIAIGCSLAAGIIAGIIPAYNASKLKPVEALRSE 415
           +   + A++      F      V +A  C+   G++ G +PA NAS+L+P  AL ++
Sbjct: 593 LSTGYAAKAFGMPVSFTPG--PVALAFACAFLTGLLFGYLPARNASRLQPAVALSAD 647