Pairwise Alignments

Query, 415 a.a., ABC transporter permease from Methanococcus maripaludis S2

Subject, 413 a.a., hypothetical protein from Sinorhizobium meliloti 1021

 Score = 66.2 bits (160), Expect = 2e-15
 Identities = 101/448 (22%), Positives = 168/448 (37%), Gaps = 81/448 (18%)

Query: 6   LFNMASKMVKSSKLRSWITILGIVIGIASVIAIISAGDYLSTSVSDQLNDMLSDEITLTA 65
           +F++A   V     ++ + ++G+ +G+   IA+                          A
Sbjct: 4   IFDIALTHVAGRGRQTLVAVIGVAVGVGFSIAM--------------------------A 37

Query: 66  SAAQGSDDDEDPELTDMDVLILNGISDIEYVDVRVSTRNE--------VRFAGGRETATI 117
           +  QG  DD   +L D        +  ++  D + S R +        V  +G R     
Sbjct: 38  ALMQGGQDDFVRQLVDT-------MPHVDVTDEQRSARRQPAEDLFEAVAISGLRPRDDR 90

Query: 118 TGVDPAVWSQMTDEELSAGRLLQASDSNAVIISYYTATEAFDREIGINQMITIGNKQFKV 177
            G+     +    EE   GRL    +   VI   Y+  E     IGI        K+ KV
Sbjct: 91  RGIINPTKAASWLEEWMPGRLAAVLNVQGVI--RYSGREVGAVVIGIEP-----EKEVKV 143

Query: 178 VGILEEDETQGFGQMGGMSSNTVYMPYEAVYTLELDDDASYSISEKEEGVYDEII----- 232
             I+E+ E+  F  +    +N V     A        D   ++S +      +I+     
Sbjct: 144 SHIVEDFESGSFAALAAGGNNVVIGDTMASRLGAGLGDTITAVSSEGLARNFKIVGLFHT 203

Query: 233 -FTLYEDVNQTTALENIQKKLMMSRHVNEDN--MDFTIRSPTVF---------------E 274
             T  ++      L+N Q        +NE    +D    +PT+                E
Sbjct: 204 GTTARDEGEAYVLLKNAQILSNRPNAINEIRIKLDDPNAAPTIARRVEAELGYKTVAWQE 263

Query: 275 GPEQIISMLTT----FLSFIAGISLIVGVTGISNTMFTTVLEKTREIGIMKAIGAKNKDI 330
             E I+  L        + +A I L+ G  GI N + T   EK R+I IMK++G    D+
Sbjct: 264 ANESILEALVVRNVIMYTVVAAIMLVAGF-GIFNIVSTITHEKARDIAIMKSLGFSQADM 322

Query: 331 MLLFVFNSAIIGLVGGFLGLVLG----TILSQIIVWFIAQSMD-SSYQFVLSIKSVVIAI 385
             LFV     IG+ G  LG  LG      LS++     A   + +      SI    +A 
Sbjct: 323 RRLFVMEGLAIGIAGSLLGWALGFAITYALSRVRFEIAATGQEMTRLPIAWSILHYAVAT 382

Query: 386 GCSLAAGIIAGIIPAYNASKLKPVEALR 413
             +L++  +AG +PA  A+++ PV+ +R
Sbjct: 383 AFALSSAAVAGYLPARRAARVNPVDIIR 410