Pairwise Alignments

Query, 415 a.a., ABC transporter permease from Methanococcus maripaludis S2

Subject, 420 a.a., LolC/E family lipoprotein releasing system, transmembrane protein (RefSeq) from Shewanella amazonensis SB2B

 Score = 58.2 bits (139), Expect = 5e-13
 Identities = 39/149 (26%), Positives = 70/149 (46%), Gaps = 14/149 (9%)

Query: 278 QIISMLTTFLSFIAGISLIVGVTGISNTMFTTVLEKTREIGIMKAIGAKNKDIMLLFVFN 337
           Q I ++ T +  +  + + V    I +T+   V +KT EI I+  +G +   I+L+F+ +
Sbjct: 269 QDIQLVRTLMYLVLALVIAVACFNIVSTLVMAVRDKTSEIAILMTMGLRRSAIVLVFMVH 328

Query: 338 SAIIGLVGGFLGLVLGTILSQIIVWFI--------AQSMDSSYQFV------LSIKSVVI 383
            AI GL+G  LG+  G +++  +             Q + S   F+      L  + V +
Sbjct: 329 GAISGLLGTLLGVSAGVLVALNLSGLAKAAESALGVQLLSSDVYFIDFLPSELHGQDVAV 388

Query: 384 AIGCSLAAGIIAGIIPAYNASKLKPVEAL 412
               +L   ++A + PAY AS  +P  AL
Sbjct: 389 VAAMALLMSLLATLYPAYKASLTEPAPAL 417