Pairwise Alignments

Query, 415 a.a., ABC transporter permease from Methanococcus maripaludis S2

Subject, 417 a.a., Lipoprotein releasing system, transmembrane protein, LolC/E family (NCBI) from Rhodospirillum rubrum S1H

 Score = 55.5 bits (132), Expect = 3e-12
 Identities = 41/145 (28%), Positives = 71/145 (48%), Gaps = 24/145 (16%)

Query: 290 IAGISLIVGVTGISNTMFTTVLEKTREIGIMKAIGAKNKDIMLLFVFNSAIIGLVGGFLG 349
           I  + ++V    I + +   V +K R+I I++ +GA    IM +F    A +G+ G   G
Sbjct: 278 ILTLIIVVAAFNIISGLIMLVKDKGRDIAILRTMGASRGAIMRIFFLAGAAVGVTGTLAG 337

Query: 350 LVLGTILSQII-------------------VWFIAQSMDSSYQFVLSIKSVVIAIGCSLA 390
           L+LG +  Q I                   ++F+A +M ++      +  V++A+G S A
Sbjct: 338 LLLGVLFCQNIEAIRQGLQSLLGVELFNAEIYFLA-TMPATMDPHEVMNVVLMALGLSFA 396

Query: 391 AGIIAGIIPAYNASKLKPVEALRSE 415
               A + PA+ A++  PVEALR+E
Sbjct: 397 ----ATLYPAWRAARTDPVEALRNE 417