Pairwise Alignments

Query, 415 a.a., ABC transporter permease from Methanococcus maripaludis S2

Subject, 856 a.a., ABC transporter permease from Rhodopseudomonas palustris CGA009

 Score = 55.1 bits (131), Expect = 8e-12
 Identities = 28/123 (22%), Positives = 60/123 (48%)

Query: 277 EQIISMLTTFLSFIAGISLIVGVTGISNTMFTTVLEKTREIGIMKAIGAKNKDIMLLFVF 336
           E+ I+  T FL+ +   +L+VG  G++N + + +  +   I  +KA+GA  +D+  +++ 
Sbjct: 265 ERTITRFTQFLTLVGLAALVVGGVGVANAVKSHIDRRRDVIATLKAVGATGRDVFAIYLT 324

Query: 337 NSAIIGLVGGFLGLVLGTILSQIIVWFIAQSMDSSYQFVLSIKSVVIAIGCSLAAGIIAG 396
              ++ L+G  +GL LG  +   +V    Q +       L    + +++   L   +  G
Sbjct: 325 QVIVLALIGAVIGLALGAAMPFALVGLFGQLLPLPVVAALHPGELALSLVYGLLTALAFG 384

Query: 397 IIP 399
           + P
Sbjct: 385 LWP 387



 Score = 34.3 bits (77), Expect = 1e-05
 Identities = 29/149 (19%), Positives = 62/149 (41%), Gaps = 5/149 (3%)

Query: 266 TIRSPTVFEGPEQIISMLTTFLSFIAGISLIVGVTGISNTMFTTVLEKTREIGIMKAIGA 325
           ++R     E    ++S L   +   + ++LI  +  +   +      +  +  I+K +GA
Sbjct: 712 SVRVREALETVGGVVSNLVLAVRGASAVTLISAILVLGGALAAGHRHRVYDAVILKTLGA 771

Query: 326 KNKDIMLLFVFNSAIIGLVGGFLGLVLGTILSQIIVWFIAQSMDSSYQFVLSIKSVVIAI 385
               ++  F    A+IGL      ++ G+  + +IV    + M  S+ +     + V+  
Sbjct: 772 TRARLIGAFALEYALIGLATAAFAVLAGSAAAWLIV---TRLMTLSFAWQAGSAAGVVVA 828

Query: 386 GCSLAAGIIAGIIPAYNASKLKPVEALRS 414
              +  G+  G+I  + A   KP   LR+
Sbjct: 829 ALVVTVGL--GLIGTWLALNQKPASVLRN 855