Pairwise Alignments

Query, 415 a.a., ABC transporter permease from Methanococcus maripaludis S2

Subject, 430 a.a., lipoprotein-releasing system transmembrane protein LolC from Phaeobacter inhibens DSM 17395

 Score = 60.5 bits (145), Expect = 1e-13
 Identities = 41/140 (29%), Positives = 64/140 (45%), Gaps = 14/140 (10%)

Query: 290 IAGISLIVGVTGISNTMFTTVLEKTREIGIMKAIGAKNKDIMLLFVFNSAIIGLVGGFLG 349
           I  I +++    I + +   V  K R+IGI++ IG     +M +F    A  G+VG  LG
Sbjct: 291 ILSILVLIATMNIVSGLIMLVKNKGRDIGILRTIGLSEGSVMRVFFLCGACTGVVGTLLG 350

Query: 350 LVLGTILSQII--------------VWFIAQSMDSSYQFVLSIKSVVIAIGCSLAAGIIA 395
           ++LG + +  I              VW  A     +    L +  V+ A+  SL    + 
Sbjct: 351 VILGCLFAIYIDPIFSFVNYVMGGGVWDPAIRGIYALPAELRLADVLSAVALSLTLSFVI 410

Query: 396 GIIPAYNASKLKPVEALRSE 415
            I PA  A+++ PVEALR E
Sbjct: 411 TIFPARRAARMNPVEALRYE 430