Pairwise Alignments

Query, 415 a.a., ABC transporter permease from Methanococcus maripaludis S2

Subject, 403 a.a., ABC-type antimicrobial peptide transport system, permease component from Dechlorosoma suillum PS

 Score =  137 bits (344), Expect = 8e-37
 Identities = 110/422 (26%), Positives = 202/422 (47%), Gaps = 41/422 (9%)

Query: 9   MASKMVKSSKLRSWITILGIVIGIASVIAIISAGDYLSTSVSDQLNDMLSDEITLTASA- 67
           +A + ++ + +RS++T+LGIVIG+A+VI +++ G+  +  V++Q++ + S+ + L     
Sbjct: 8   LALREIRRNLMRSFLTVLGIVIGVAAVITMVTLGNGATRMVAEQISSLGSNLLILRPGQR 67

Query: 68  -AQGSDDDEDPELTDMDV-LILNGISDIEYVDVRVSTRNEVRFAGGRETATITGVDPAVW 125
              G D    P     DV  +L  +  ++ V   VS+   +       ++++TG   A +
Sbjct: 68  LGPGRDSAGAPNFRAADVEALLTQVPSLKAVAPVVSSTVTLVAGAENWSSSVTGSTNAYF 127

Query: 126 ----------SQMTDEELSAGRLLQASDSNAVIISYYTATEAFDREIGINQMITIGNKQF 175
                      Q +DEE+ AG+ +        +I      + F  +  +   + + N   
Sbjct: 128 VAGNWKLAAGRQFSDEEMRAGKAV-------CVIGNTVKQKLFAGQSPLGNAVRVKNFSC 180

Query: 176 KVVGILEEDETQGFGQMGGMSSNTVYMPYEAVYTLELDDDASYSISEKEEGVYDEIIFTL 235
           ++VGIL    ++G G MG    + V MP            A   ++ K + V   ++ +L
Sbjct: 181 EIVGILA---SKGQGAMGMDQDDVVLMPLVT---------AQRRLTGKTQDV-STLMLSL 227

Query: 236 YEDVNQTTALENIQKKLMMSRHV--NEDNMDFTIRSPTVFEGPEQIISMLTTFLSFIAGI 293
            +  +    +E I++ +   R +  N+D+    + +  + E     I  +TT L  +A +
Sbjct: 228 KDGASSPRVMEQIRQLMRERRKLAENDDDNFNLMDTKQIAEALSGTIGTMTTLLGAVAAV 287

Query: 294 SLIVGVTGISNTMFTTVLEKTREIGIMKAIGAKNKDIMLLFVFNSAIIGLVGGFLGLVLG 353
           SL+VG  GI N M  +V E+TREIGI  AIGA   +++L F+  +  +   GG +G++L 
Sbjct: 288 SLLVGGIGIMNIMLVSVTERTREIGIRLAIGALENEVLLQFLIEAVALSAFGGLVGIILA 347

Query: 354 TILSQIIVWFIAQSMDSSYQFVLSIKSVVIAIGCSLAAGIIAGIIPAYNASKLKPVEALR 413
            +        +  S      F+ +    ++A G S A G+I G +PA  A+ L P+EALR
Sbjct: 348 LLAC------LGLSALMGMPFLFNPGINLLAFGFSAAIGVIFGYVPARRAAGLDPIEALR 401

Query: 414 SE 415
            E
Sbjct: 402 HE 403