Pairwise Alignments

Query, 415 a.a., ABC transporter permease from Methanococcus maripaludis S2

Subject, 406 a.a., ABC-type antimicrobial peptide transport system, permease component from Dechlorosoma suillum PS

 Score =  122 bits (307), Expect = 1e-32
 Identities = 107/422 (25%), Positives = 185/422 (43%), Gaps = 44/422 (10%)

Query: 10  ASKMVKSSKLRSWITILGIVIGIASVIAIISAGDYLSTSVSDQLNDMLSDEITL----TA 65
           A + + +++LR+++T+LG+VIG+ +V+ +++ G     +V+  +N M S+   +    T 
Sbjct: 9   AWRAMGANRLRTFLTMLGMVIGVGAVVLMLAIGQGAQYAVAQSINSMGSNLFIVLSGFTN 68

Query: 66  SAAQGSDDDEDPELTDMDVLILNGISDIEYVDVRVSTRNEVRFAGGRETATITGVDPAV- 124
           +    S     P LT  D   +  +  +E          ++ +      + + G  PA  
Sbjct: 69  AGGVRSGSGNAPTLTVTDAEAITELDGVETAAPVHQGSAQLVYGSSNWNSYVIGTTPAYL 128

Query: 125 ----W-----SQMTDEELSAGRLLQASDSNAVIISYYTATEAFDREIGINQMITIGNKQF 175
               W     S  TD +L A        +   +I    A   F  E    + + IG   F
Sbjct: 129 DVRSWALVDGSPFTDSDLRAS-------TRVALIGKTAAQNLFGAENPTGKTLRIGQAPF 181

Query: 176 KVVGILEEDETQGFGQMGGMSSNTVYMPYEAVYTLELDDDASYSISEKEEGVYDEIIFTL 235
            ++G+L     +G    G    + + +P               S+           I   
Sbjct: 182 LILGVLAP---KGQSLDGRDQDDVLIVPLTTAQRKLFGTPFQGSV---------RAIMVK 229

Query: 236 YEDVNQTTALENIQKKLMMSRH---VNEDNMDFTIRSPT-VFEGPEQIISMLTTFLSFIA 291
                   A+EN    L+  RH     +D+ DF +R+ T V +   +   +++  L  IA
Sbjct: 230 AAAPEVMPAVENSMNALLRQRHRIRPGQDD-DFNVRNLTAVADSAAETTRIMSLLLGAIA 288

Query: 292 GISLIVGVTGISNTMFTTVLEKTREIGIMKAIGAKNKDIMLLFVFNSAIIGLVGGFLGLV 351
            +SL+VG  GI N M  +V E+TREIGI  AIGA+ KDI+  F+  + +I + G  +GL+
Sbjct: 289 SVSLLVGGIGIMNIMLVSVTERTREIGIRMAIGAREKDILTQFLLEAIVISIAGCLIGLL 348

Query: 352 LGTILSQIIVWFIAQSMDSSYQFVLSIKSVVIAIGCSLAAGIIAGIIPAYNASKLKPVEA 411
           LG      I   +  ++ +    ++S  SV++A   +   GI  G  PA  A++L P+EA
Sbjct: 349 LG------IGGAVLTNLLTGTAVIISGSSVIVAFSVAAGVGIFFGYYPARKAARLDPIEA 402

Query: 412 LR 413
           LR
Sbjct: 403 LR 404