Pairwise Alignments

Query, 415 a.a., ABC transporter permease from Methanococcus maripaludis S2

Subject, 407 a.a., ABC transporter permease from Methanococcus maripaludis JJ

 Score =  408 bits (1048), Expect = e-118
 Identities = 215/416 (51%), Positives = 294/416 (70%), Gaps = 10/416 (2%)

Query: 1   MKPLKLFNMASKMVKSSKLRSWITILGIVIGIASVIAIISAGDYLSTSVSDQLNDMLSDE 60
           MKP K+F +A  MVK SKLRSWITI+G+V+ +ASVI IISAG+ +   V+ +L  +  D 
Sbjct: 1   MKPSKIFKLAFNMVKGSKLRSWITIIGVVVAVASVITIISAGELMEKQVTHELEKLGGDV 60

Query: 61  ITLTASAAQGSDDDEDPELTDMDVLILNGISDIEYVDVRVSTRNEVRFAGGRETATITGV 120
           I++ A   + S   + PELT  DVL++ GI  ++YVD RV++ +++ +      + ITGV
Sbjct: 61  ISVYAITTETSS--KTPELTKTDVLVIKGIPSVKYVDKRVTSYSKISYGDKELYSQITGV 118

Query: 121 DPAVWSQMTDEELSAGRLLQASDSNAVIISYYTATEAFDREIGINQMITIGNKQFKVVGI 180
           DPAVW ++T E++  GR+LQ  D N V+I+ Y A E F+R+I INQ+I IGNK F+V+GI
Sbjct: 119 DPAVWPKITQEKVETGRMLQPGDKNVVVINNYLANEEFNRKININQIIKIGNKSFRVIGI 178

Query: 181 LEEDETQGFGQMGGMSSNTVYMPYEAVYTLELDDDASYSISEKEEGVYDEIIFTLYEDVN 240
           L+ D +     +  + S  +Y P ++VY +E D D  YS+  KE G YD +   L E+V+
Sbjct: 179 LDNDSSG----LASLFSGGIYAPLDSVYDIEQDSD--YSVP-KERGTYDSLEIKLKENVD 231

Query: 241 QTTALENIQKKLMMSRHVNEDNMDFTIRSPTVF-EGPEQIISMLTTFLSFIAGISLIVGV 299
              A+++I++KL  SRHV E N DF I S   F E  + II  +T FLSFIAGISLIVG 
Sbjct: 232 TDAAVQDIEQKLRTSRHVTEKNQDFYISSAKSFIESSQSIIGGITLFLSFIAGISLIVGA 291

Query: 300 TGISNTMFTTVLEKTREIGIMKAIGAKNKDIMLLFVFNSAIIGLVGGFLGLVLGTILSQI 359
            GISNTMFT VLEKT+EIGIMKAIGAKN+DI+LLF+FNS +IGL GGFLGL++G +++Q+
Sbjct: 292 FGISNTMFTAVLEKTKEIGIMKAIGAKNEDILLLFLFNSGLIGLAGGFLGLLIGVLITQV 351

Query: 360 IVWFIAQSMDSSYQFVLSIKSVVIAIGCSLAAGIIAGIIPAYNASKLKPVEALRSE 415
           I + IA    + ++F +SIKSVV+A+  S+ AGI+AG +PAYNASKLKPV+ALRSE
Sbjct: 352 ITYVIALKFGTPFEFYVSIKSVVVALVVSIGAGILAGAVPAYNASKLKPVDALRSE 407