Pairwise Alignments

Query, 415 a.a., ABC transporter permease from Methanococcus maripaludis S2

Subject, 411 a.a., lipoprotein releasing system, permease protein (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score = 68.2 bits (165), Expect = 4e-16
 Identities = 101/436 (23%), Positives = 185/436 (42%), Gaps = 90/436 (20%)

Query: 21  SWITILGIVIGIASVIAIISAGDYLSTSVSDQLNDMLSDEITLTASAAQGSDDDEDPELT 80
           S ++I+G+ +G+AS+I ++   +  +T + D++    +  I +++  A   D  E     
Sbjct: 25  SAMSIIGVGLGVASLIVVLGVMNGFTTDLRDKILGANAHVIVMSSKPAAMRDVGELMGRV 84

Query: 81  DMDVLILNGISDIEYVDVRVSTRNEVRFAGGRETATITGVDP-------AVWSQMTD--- 130
             DV  + G +   Y +  +ST + V+         + G+DP       ++ S+MT    
Sbjct: 85  Q-DVRGVKGATPFIYSETMLSTPHGVK------GLVLRGIDPQTAPGVLSILSRMTRGGL 137

Query: 131 EELSAGRLLQASDSNAVIISYYTATEAFDREIGINQMITIGNKQFKVVGILEED---ETQ 187
            +L AG       ++ +II          +E+     IT G++    V +L  D    T 
Sbjct: 138 RDLPAG----PDGAHGIIIG---------QELANRLGITTGSR----VNLLSPDGQKTTT 180

Query: 188 GFG------QMGGMSSNTVYMPYEAVYTLELDDDASYSISEKEEGVYDEIIFTLYEDVNQ 241
           GF       ++ G+ +  +Y    ++  + LD  A+  I    EG              Q
Sbjct: 181 GFAPRIRPFRVAGIFTTGMYEYDSSLGFVTLD--AARDILGLPEG--------------Q 224

Query: 242 TTALENIQKKLMMSRHVNEDNMDFTIRSPTVFEGPEQI-------ISMLTTFLSFIAGIS 294
            + +E +   +  +  + ED +  +   P       ++       + +  T +  I  + 
Sbjct: 225 VSGIEVVVDDVYKADVIGEDVLKASGGYPYYVRNWMEMNANLFAALKLEKTAMFVILALI 284

Query: 295 LIVGVTGISNTMFTTVLEKTREIGIMKAIGAKNKDIMLLFVFNSAIIGLVGGFLGLVLGT 354
           ++VG   I  T+   V+EKTR+I I+ ++GA    +  +F+    IIG +G  LG VLG 
Sbjct: 285 VLVGSFSIVTTLVMLVMEKTRDIAILMSMGATRSMVRRIFMLQGTIIGAIGTALGYVLGL 344

Query: 355 ILSQIIVWFIAQSMDSSYQF------VLSIKSVVIAI---------GCSLAAGIIAGIIP 399
            +S    W + +     YQF      V SI  + + +         G ++    +A I P
Sbjct: 345 SVS----WALQR-----YQFIKLPQGVYSIDHLPVLLQWSDLAAVGGAAMLLCFLATIYP 395

Query: 400 AYNASKLKPVEALRSE 415
           A  A+ L+PVEALR E
Sbjct: 396 ARQAAALEPVEALRYE 411