Pairwise Alignments

Query, 415 a.a., ABC transporter permease from Methanococcus maripaludis S2

Subject, 426 a.a., lipoprotein releasing system transmembrane protein lolE from Caulobacter crescentus NA1000

 Score = 55.1 bits (131), Expect = 4e-12
 Identities = 38/136 (27%), Positives = 66/136 (48%), Gaps = 20/136 (14%)

Query: 297 VGVTGISNTMFTTVLEKTREIGIMKAIGAKNKDIMLLFVFNSAIIGLVGGFLGLVLGTI- 355
           +    I +++   V  K ++I I++ +GA    ++ +F+   A IG+ G   GL LG + 
Sbjct: 294 IATLNIISSLVMLVKNKGKDIAILRTMGASQGAVLRIFLMAGASIGVAGTLCGLALGVLF 353

Query: 356 ------LSQIIVWFIAQSMDSSYQFVLS----------IKSVVIAIGCSLAAGIIAGIIP 399
                 +   + W    S+ ++  ++LS          +  +V+A   S A  I+A + P
Sbjct: 354 CAYITPIQNFVEWATGTSVFNADVYMLSHIPAKIDWREVGGIVLA---SAAMSILATLPP 410

Query: 400 AYNASKLKPVEALRSE 415
           A  AS+L PVEALR E
Sbjct: 411 ALRASRLDPVEALRYE 426