Pairwise Alignments

Query, 221 a.a., molybdate ABC transporter permease subunit from Methanococcus maripaludis S2

Subject, 293 a.a., sulfate ABC transporter, permease protein (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  104 bits (259), Expect = 2e-27
 Identities = 59/212 (27%), Positives = 109/212 (51%), Gaps = 5/212 (2%)

Query: 8   VLLTLKISFLSTFFVFFI----GIFISYILAKVEFRGRNMLEIIVTLPMVLPPTVLGYLL 63
           V+ + K+SF ++F    I    G  ++++L + +F G+ +++ +V LP  LP  V G  L
Sbjct: 75  VVASYKLSFAASFIGATINAVFGTLVAWVLVRYQFLGKKVVDALVDLPFALPTAVAGIAL 134

Query: 64  ALQLGKNGVIGSLFYKLTGSGILFTWEAGVIASFVVSLPLMVKTTTAAISAVDKELEHVS 123
                  G +G   Y L G  + ++    VIA   + LP +V+T    ++   KELE  S
Sbjct: 135 VTLYSTTGWVGQYLY-LWGIKVAYSEIGVVIALTYIGLPFVVRTVQPVLADFSKELEEAS 193

Query: 124 YTLGNTKLGTALLITLPLSKKGIIAGIVLSFARSVGEFGATLMVAGNMPGKTNTMSLSIY 183
            +LG ++  T   + LP     ++ G  L+FAR+VGE+G+ + ++GN+P +T    L I 
Sbjct: 194 ASLGASRFTTIKRVILPAVLPALLTGYALAFARAVGEYGSVIFISGNLPYRTEITPLLIV 253

Query: 184 QAFQTGQYDLANILVITLILMSFLSIYITGKM 215
              +   Y+ A  + + ++  +F+ + I   +
Sbjct: 254 SKAEQYDYNGAAAIGVVMLAAAFILLLIINSL 285