Pairwise Alignments

Query, 445 a.a., formylmethanofuran dehydrogenase subunit B from Methanococcus maripaludis S2

Subject, 901 a.a., Uncharacterized anaerobic dehydrogenase from Pseudomonas stutzeri RCH2

 Score = 57.8 bits (138), Expect = 1e-12
 Identities = 59/229 (25%), Positives = 98/229 (42%), Gaps = 28/229 (12%)

Query: 11  CPVCGGTCDDIEVEYDKEKRDIVVRNA---------CKMGAAKFREIVSNHRITSPKIRI 61
           C  CG  C  + +E+D E+   V  +          C  G+        + R   P++R+
Sbjct: 9   CCYCGVGCG-VLIEHDGERILDVAGDPSHPANFGKLCSKGSTLHLTGDLDARALYPELRL 67

Query: 62  NGKLEDSK--WEDAIEKAAEILVNAKRP------LFFMGSETSCEAMTVGLHMGEYLGGI 113
              L  S+  W+ A+E AA +     R        F++  +   E       M   L G 
Sbjct: 68  GKGLARSRTDWDSALEHAASVFAETIREHGPDSVAFYVSGQLLTEDYYAFNKMARALVGT 127

Query: 114 --VDSNSTICHGPSLMGVQEAGKAGAT--AGETKNRADVVIYWGVNPMCSMPRHMSRYAV 169
             +DSNS +C   +++G + +  A A   + E    AD ++  G N   + P       +
Sbjct: 128 NNLDSNSRLCMSSAVVGYKRSLGADAPPCSYEDIELADCLLIAGSNMAYAHP------VL 181

Query: 170 FPRGYFVQKGRKERKVITVDPRVSETAKGSDIHLQLKPSTDYELFSALM 218
           F R    +  R E  +I VDPR ++T++ +D+HL + P TD  LF  L+
Sbjct: 182 FRRLEEAKAKRPEMTIIVVDPRRTDTSELADLHLPILPGTDVALFHGLL 230



 Score = 25.8 bits (55), Expect = 0.006
 Identities = 13/44 (29%), Positives = 20/44 (45%), Gaps = 6/44 (13%)

Query: 124 PSLMGVQEAGKAG------ATAGETKNRADVVIYWGVNPMCSMP 161
           P+ MG +E G           A   ++RA+V  YWG+  +   P
Sbjct: 335 PNAMGGRETGSLSNLLPGHRDATNAEHRAEVAHYWGIEQLPKQP 378