Pairwise Alignments

Query, 445 a.a., formylmethanofuran dehydrogenase subunit B from Methanococcus maripaludis S2

Subject, 1428 a.a., formate dehydrogenase, alpha subunit (NCBI ptt file) from Shewanella oneidensis MR-1

 Score = 73.9 bits (180), Expect = 3e-17
 Identities = 88/394 (22%), Positives = 159/394 (40%), Gaps = 61/394 (15%)

Query: 5    TFKDIVCPVCGGTCD-DIEVEYDKEK-------RDIVVRNA--CKMGAAKFREIVSNHRI 54
            T    +C  CG  C  D++++    +       +D VV     C  G   F  I S+ R+
Sbjct: 736  TTASTICTYCGVGCRLDLKIDPSTNRIRHIEGNKDSVVNQGMLCVKGRFGFDFIHSDKRL 795

Query: 55   TSPKIRINGKLEDSKWEDAIEKAAEILVNAKR-------PLFFMGSETSCEAMTVGLHMG 107
            T+P IR NGKL+   W +AI+  A+ L   K+               T+ +   +   + 
Sbjct: 796  TTPLIRKNGKLQPCSWPEAIDYVAKRLTEIKQKDGSNAFASLASAKATNEDNFVLQKFVR 855

Query: 108  EYLG-GIVDSNSTICHGPSLMGVQEAGKAGATAGE--TKNRADVVIYWGVNPMCSMPRHM 164
              LG   +D  + +CH  ++ G+Q++  +GA   +  +   +DV+   G +  C+ P   
Sbjct: 856  SVLGTNNIDHCARLCHSSTVTGLQQSIGSGAMTNDILSIKDSDVIFILGSDTTCAHPIIA 915

Query: 165  SRYAVFPRGYFVQKGRKERKVITVDPRVSETAKGSDIHLQLKPSTDYELFSALM------ 218
            S+       Y         ++I  DP+    A+ +++++  +P TD  L +A+M      
Sbjct: 916  SKIQQAVNLY-------GARLIVADPKRVGIAEKAELYVAHRPGTDVMLLNAIMAEIIRN 968

Query: 219  -------LAVKGKPIHP----------SIEQ---VTGISVEKILEVAQIMKNAKFGSIYG 258
                   +A + + I            S+E+   +TG+  E I  +A+ +  A+  ++Y 
Sbjct: 969  NWQDKDYIAKRTEGIEALYAELAKEDYSLEKAALITGVKAENIARIARTIGTAQKTAVYY 1028

Query: 259  GLGLASSFGKHRNLECVLTLNKELQKYAKFQIGL--IRGHCNVAG---FNVLASYLYGFP 313
             +G+      H N+  +  L            G+  +RG  NV G      L +Y  G+ 
Sbjct: 1029 AMGITQHTTGHDNVTAISNLQLLCGNIGVSGAGINPLRGQSNVQGACDMGALPNYFTGYQ 1088

Query: 314  FGVDFSRGYPRYNPGEHTTTDVLREKEVDAVFVM 347
               D    + R     H  T +  E  V A  +M
Sbjct: 1089 KVTDI---HARMRFESHWQTPLSGEIGVTATHMM 1119