Pairwise Alignments
Query, 415 a.a., formylmethanofuran dehydrogenase subunit C from Methanococcus maripaludis S2
Subject, 312 a.a., hypothetical protein from Methanococcus maripaludis JJ
Score = 59.3 bits (142), Expect = 2e-13
Identities = 34/95 (35%), Positives = 51/95 (53%), Gaps = 8/95 (8%)
Query: 104 GGEILVKGDVKPWAGREMEGGTLHIFGNAGDHLGGCYRGRWEGMLGGTIIVEGDAGNNVG 163
G +I V G+V G M+ GT+ + GNAG + G RG GT+I+ G+ G+
Sbjct: 197 GSKITVNGNVDLSTGILMKNGTVLVNGNAGKNTGSVLRG-------GTVIITGNTGDFTA 249
Query: 164 DGMVDGKIVVNGNVRAFCGIRLNGGVLYV-GGNAI 197
M+ G I+++GN F G + GV+Y G+AI
Sbjct: 250 SDMISGTIIIDGNAGKFLGSKKKKGVIYAKDGSAI 284
Score = 53.1 bits (126), Expect = 1e-11
Identities = 34/94 (36%), Positives = 46/94 (48%), Gaps = 8/94 (8%)
Query: 79 IGFQMTAG-KIIVEGDAGFHVGCEMKGGEILVKGDVKPWAGREMEGGTLHIFGNAGDHLG 137
IG ++ G KI V G+ G MK G +LV G+ G + GGT+ I GN GD
Sbjct: 190 IGARLENGSKITVNGNVDLSTGILMKNGTVLVNGNAGKNTGSVLRGGTVIITGNTGDFTA 249
Query: 138 GCYRGRWEGMLGGTIIVEGDAGNNVGDGMVDGKI 171
M+ GTII++G+AG +G G I
Sbjct: 250 -------SDMISGTIIIDGNAGKFLGSKKKKGVI 276
Score = 48.9 bits (115), Expect = 2e-10
Identities = 25/65 (38%), Positives = 38/65 (58%), Gaps = 1/65 (1%)
Query: 74 GNVKL-IGFQMTAGKIIVEGDAGFHVGCEMKGGEILVKGDVKPWAGREMEGGTLHIFGNA 132
GNV L G M G ++V G+AG + G ++GG +++ G+ + +M GT+ I GNA
Sbjct: 204 GNVDLSTGILMKNGTVLVNGNAGKNTGSVLRGGTVIITGNTGDFTASDMISGTIIIDGNA 263
Query: 133 GDHLG 137
G LG
Sbjct: 264 GKFLG 268
Score = 48.9 bits (115), Expect = 2e-10
Identities = 22/63 (34%), Positives = 35/63 (55%)
Query: 147 MLGGTIIVEGDAGNNVGDGMVDGKIVVNGNVRAFCGIRLNGGVLYVGGNAIRAVGVEMKK 206
M GT++V G+AG N G + G +++ GN F + G + + GNA + +G + KK
Sbjct: 214 MKNGTVLVNGNAGKNTGSVLRGGTVIITGNTGDFTASDMISGTIIIDGNAGKFLGSKKKK 273
Query: 207 GTI 209
G I
Sbjct: 274 GVI 276
Score = 44.7 bits (104), Expect = 4e-09
Identities = 27/77 (35%), Positives = 41/77 (53%), Gaps = 2/77 (2%)
Query: 160 NNVGDGMVDG-KIVVNGNVRAFCGIRLNGGVLYVGGNAIRAVGVEMKKGTIIVAGKIKNF 218
+ +G + +G KI VNGNV GI + G + V GNA + G ++ GT+I+ G +F
Sbjct: 188 DTIGARLENGSKITVNGNVDLSTGILMKNGTVLVNGNAGKNTGSVLRGGTVIITGNTGDF 247
Query: 219 -APGFISTGVVSDYETG 234
A IS ++ D G
Sbjct: 248 TASDMISGTIIIDGNAG 264
Score = 42.7 bits (99), Expect = 1e-08
Identities = 26/80 (32%), Positives = 36/80 (45%)
Query: 149 GGTIIVEGDAGNNVGDGMVDGKIVVNGNVRAFCGIRLNGGVLYVGGNAIRAVGVEMKKGT 208
G I V G+ + G M +G ++VNGN G L GG + + GN +M GT
Sbjct: 197 GSKITVNGNVDLSTGILMKNGTVLVNGNAGKNTGSVLRGGTVIITGNTGDFTASDMISGT 256
Query: 209 IIVAGKIKNFAPGFISTGVV 228
II+ G F GV+
Sbjct: 257 IIIDGNAGKFLGSKKKKGVI 276
Score = 28.9 bits (63), Expect = 2e-04
Identities = 39/167 (23%), Positives = 65/167 (38%), Gaps = 23/167 (13%)
Query: 152 IIVEGDAGNNVGDGMVDGKIVVNGNVRAFCGIRLNGGVLYVGGNAIRAVGVEMKKGTIIV 211
+ ++GD G+ M G+ G ++ G + V GN G+ M GT+ +
Sbjct: 73 VYIKGDVGHRFCSSMGADLKYFGGS-----GGKIQTGTVIVDGNIDTRFGISMVSGTVYL 127
Query: 212 AGKIKNFAPGFISTGVVSDYETGLSGLALPGKLIGF-----NGDQAFFNKPKGKLYVSLS 266
K P G + + E+ +SG K I + Q KP L
Sbjct: 128 NEKFSLKEP----IGNIIEVESDISGYK---KYISITELMESNSQEKVLKPNVFKNNELI 180
Query: 267 ENYDLLNDELPAK---ERPIEFKGNALKVILNTGSTIEQGRIIKGGN 310
N +++ D + A+ I GN V L+TG ++ G ++ GN
Sbjct: 181 LNDNVIRDTIGARLENGSKITVNGN---VDLSTGILMKNGTVLVNGN 224
Score = 28.5 bits (62), Expect = 3e-04
Identities = 38/163 (23%), Positives = 53/163 (32%), Gaps = 68/163 (41%)
Query: 107 ILVKGDVKPWAGREMEGGTLHIFGNAGDHLGGCYRGRWEGMLGGTIIVEGDAGNNVGDGM 166
+ +KGDV M G L FG +G + GT+IV+G+ G M
Sbjct: 73 VYIKGDVGHRFCSSM-GADLKYFGGSGGKIQT-----------GTVIVDGNIDTRFGISM 120
Query: 167 VDGKIVVN---------GNV---------------------------------------- 177
V G + +N GN+
Sbjct: 121 VSGTVYLNEKFSLKEPIGNIIEVESDISGYKKYISITELMESNSQEKVLKPNVFKNNELI 180
Query: 178 ------RAFCGIRL-NGGVLYVGGNAIRAVGVEMKKGTIIVAG 213
R G RL NG + V GN + G+ MK GT++V G
Sbjct: 181 LNDNVIRDTIGARLENGSKITVNGNVDLSTGILMKNGTVLVNG 223
Score = 27.3 bits (59), Expect = 6e-04
Identities = 15/42 (35%), Positives = 23/42 (54%), Gaps = 2/42 (4%)
Query: 69 IAGDAGNVKLIGFQMTAGKIIVEGDAGFHVGCEMKGGEILVK 110
I G+ G+ M +G II++G+AG +G + K G I K
Sbjct: 240 ITGNTGD--FTASDMISGTIIIDGNAGKFLGSKKKKGVIYAK 279