Pairwise Alignments

Query, 415 a.a., formylmethanofuran dehydrogenase subunit C from Methanococcus maripaludis S2

Subject, 251 a.a., glutamate synthase, large subunit (VIMSS_AUTO) from Desulfovibrio vulgaris Hildenborough JW710

 Score = 57.0 bits (136), Expect = 6e-13
 Identities = 48/148 (32%), Positives = 66/148 (44%), Gaps = 29/148 (19%)

Query: 90  VEGDAGFHV--------GCEMKGGEILVKGDVKPWAGREMEGGTLHIFGNAGDHLGGCYR 141
           VEGD   ++        G  M+G  I V+G+ +   G  M+GG + I G AGD LG    
Sbjct: 47  VEGDVSINILGVPGQDLGAFMRGPHIRVQGNAQDGVGNTMDGGHIVIDGMAGDVLG---- 102

Query: 142 GRWEGMLGGTIIVEGDAGNNVGDGMVD-----GKIVVNGNVRAFCGIRLNGGVLYVGGN- 195
                M  G+I+V GD G  VG  M         IVV G    F G  + GGV+ + G  
Sbjct: 103 ---YAMRDGSILVRGDVGYRVGIHMKSYLDRVPVIVVGGKAGDFLGEYMAGGVIVLLGMD 159

Query: 196 --------AIRAVGVEMKKGTIIVAGKI 215
                   A R++G  M  G I + G++
Sbjct: 160 TGKPEAPVAGRSLGTGMHGGVIYIRGEV 187



 Score = 53.1 bits (126), Expect = 9e-12
 Identities = 42/125 (33%), Positives = 61/125 (48%), Gaps = 23/125 (18%)

Query: 67  IKIAGDAGNVKLIGFQMTAGKIIVEGDAGFHVGCEMKGGEILVKGDVKPWAGREMEG--- 123
           I++ G+A +   +G  M  G I+++G AG  +G  M+ G ILV+GDV    G  M+    
Sbjct: 72  IRVQGNAQDG--VGNTMDGGHIVIDGMAGDVLGYAMRDGSILVRGDVGYRVGIHMKSYLD 129

Query: 124 --GTLHIFGNAGDHLGGCYRGRWEGMLGGTIIVEG---------DAGNNVGDGMVDGKIV 172
               + + G AGD LG       E M GG I++ G          AG ++G GM  G I 
Sbjct: 130 RVPVIVVGGKAGDFLG-------EYMAGGVIVLLGMDTGKPEAPVAGRSLGTGMHGGVIY 182

Query: 173 VNGNV 177
           + G V
Sbjct: 183 IRGEV 187



 Score = 46.2 bits (108), Expect = 1e-09
 Identities = 41/140 (29%), Positives = 64/140 (45%), Gaps = 13/140 (9%)

Query: 64  DMVIKIAGDAGNVKLIGFQMTAGKIIVEGDAGFHVGCEMKGGEILVKGDVKPWAGREMEG 123
           D+ I I G  G    +G  M    I V+G+A   VG  M GG I++ G      G  M  
Sbjct: 50  DVSINILGVPGQD--LGAFMRGPHIRVQGNAQDGVGNTMDGGHIVIDGMAGDVLGYAMRD 107

Query: 124 GTLHIFGNAGDHLGGCYRGRWEGMLGGTIIVEGDAGNNVGDGMVDGKIVVNGN------- 176
           G++ + G+ G  +G   +   + +    I+V G AG+ +G+ M  G IV+ G        
Sbjct: 108 GSILVRGDVGYRVGIHMKSYLDRV--PVIVVGGKAGDFLGEYMAGGVIVLLGMDTGKPEA 165

Query: 177 --VRAFCGIRLNGGVLYVGG 194
                  G  ++GGV+Y+ G
Sbjct: 166 PVAGRSLGTGMHGGVIYIRG 185



 Score = 38.5 bits (88), Expect = 2e-07
 Identities = 34/105 (32%), Positives = 44/105 (41%), Gaps = 35/105 (33%)

Query: 67  IKIAGDAGNVKLIGFQMTAGKIIVEGDAGFHVGCEMK----------------------- 103
           I I G AG+V  +G+ M  G I+V GD G+ VG  MK                       
Sbjct: 91  IVIDGMAGDV--LGYAMRDGSILVRGDVGYRVGIHMKSYLDRVPVIVVGGKAGDFLGEYM 148

Query: 104 -GGEILVKG-----DVKPWAGRE----MEGGTLHIFGNAGDHLGG 138
            GG I++ G        P AGR     M GG ++I G   +HL G
Sbjct: 149 AGGVIVLLGMDTGKPEAPVAGRSLGTGMHGGVIYIRGEVPEHLLG 193