Pairwise Alignments

Query, 266 a.a., ABC transporter permease from Methanococcus maripaludis S2

Subject, 290 a.a., Binding-protein-dependent transport systems inner membrane component from Pseudomonas syringae pv. syringae B728a

 Score =  126 bits (316), Expect = 6e-34
 Identities = 73/240 (30%), Positives = 137/240 (57%), Gaps = 4/240 (1%)

Query: 17  VFILFI---LMIVMSIVTNISFETFYDSLFSKEIQFAIKLSLETASIATILGTLLGVPAA 73
           VF+LF+   L IV+S         F+ ++   +   A+KL++    I+  L  + GV AA
Sbjct: 33  VFVLFLGLPLFIVVSQGLKNGLGAFFIAILEPDALSALKLTVIAVLISVPLNLVFGVSAA 92

Query: 74  YALARYNFKGKDIVDSIVELPVILPPLITGFALLVFFG-NTVFGKFITENIIEILFTYKG 132
           + +++Y+F+GK I+ ++++LP  + P+I G   ++ FG   +FG ++ ++ I+I+F   G
Sbjct: 93  WCVSKYSFRGKSILVTLIDLPFSVSPVIAGLVYVLMFGAQGLFGPWLQDHDIQIVFALPG 152

Query: 133 TIVAQFFVATPFIIRTSKSVFECIDEKYELIAQSLGSKKYESFLDVVIPMAKNGIIAGAI 192
            ++A  FV  PF+ R    + +    + E  A+ LG+  ++ F  V +P  K G+I G +
Sbjct: 153 IVLATIFVTVPFVARELIPLMQEQGTQEEEAARLLGANGWQMFWHVTVPNIKWGLIYGVV 212

Query: 193 LAWARSIGEFGATMMLAGATKMKTETLPIAVFLNISLGDLEKALAVSLIFLLVATLVLVI 252
           L  AR++GEFGA  +++G  +  T TLP+ V +  +  +   A AV+ + L++A  +L++
Sbjct: 213 LCTARAMGEFGAVSVVSGHIRGVTNTLPLHVEILYNEYNHVAAFAVASLLLILALFILLL 272