Pairwise Alignments

Query, 266 a.a., ABC transporter permease from Methanococcus maripaludis S2

Subject, 255 a.a., ABC transporter permease from Methanococcus maripaludis JJ

 Score =  137 bits (345), Expect = 2e-37
 Identities = 71/252 (28%), Positives = 148/252 (58%), Gaps = 9/252 (3%)

Query: 8   KFFSLFALSV---FILFILMIVMSIVTNISFETFYDSLFSKEIQFAIKLSLETASIATIL 64
           K F+L  L +    +LF+L+ +++++ N        ++   E+  ++ +S++ AS AT L
Sbjct: 5   KGFNLLFLVISLFLLLFVLLPLLNMILNPG--NVAGAIHDSEVIKSLLVSIKAASTATAL 62

Query: 65  GTLLGVPAAYALARYNFKGKDIVDSIVELPVILPPLITGFALLVFFGNTVFGKFITENII 124
              LG+P +Y LARY+F GK++V++I+++P+ +P  + G  +L FF  T  G+ I     
Sbjct: 63  AIFLGIPLSYLLARYHFTGKNVVEAIIDIPMAIPHSVIGIMILAFFYGTSIGRGIENIGF 122

Query: 125 EILFTYKGTIVAQFFVATPFIIRTSKSVFECIDEKYELIAQSLGSKKYESFLDVVIPMAK 184
           EI+  + G +V   +V  P+++ + +  F  ++E+ E ++++LG+ K ++F ++ +P+ K
Sbjct: 123 EIVDNFWGIVVVMLYVGLPYMVNSGRDGFLMVNEELENVSRTLGASKIKTFFNISLPLIK 182

Query: 185 NGIIAGAILAWARSIGEFGATMMLAGATKMKTETLPIAVFLNISLGDLEKALAVSLIFLL 244
           N +++G+IL +AR I E GA +++A   K    T P+ +    +   L  +  +S+I ++
Sbjct: 183 NNLVSGSILTFARGISEVGAILIVAYFPK----TTPVLILDRFNEYGLSSSKPISVIMIV 238

Query: 245 VATLVLVIIRSV 256
           ++ ++  + R V
Sbjct: 239 LSIVLFSVFRLV 250