Pairwise Alignments

Query, 266 a.a., ABC transporter permease from Methanococcus maripaludis S2

Subject, 293 a.a., sulfate ABC transporter, permease protein (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  127 bits (319), Expect = 3e-34
 Identities = 66/248 (26%), Positives = 134/248 (54%), Gaps = 1/248 (0%)

Query: 10  FSLFALSVFILFILMIVMSIVTNISFETFYDSLFSKEIQFAIKLSLETASIATILGTLLG 69
           FS+  LS+  L  +  ++     +S+  F+ ++   ++  + KLS   + I   +  + G
Sbjct: 38  FSVLYLSLLFLLPVAGLILFTLQMSWADFWVAISHPQVVASYKLSFAASFIGATINAVFG 97

Query: 70  VPAAYALARYNFKGKDIVDSIVELPVILPPLITGFALLVFFGNTVF-GKFITENIIEILF 128
              A+ L RY F GK +VD++V+LP  LP  + G AL+  +  T + G+++    I++ +
Sbjct: 98  TLVAWVLVRYQFLGKKVVDALVDLPFALPTAVAGIALVTLYSTTGWVGQYLYLWGIKVAY 157

Query: 129 TYKGTIVAQFFVATPFIIRTSKSVFECIDEKYELIAQSLGSKKYESFLDVVIPMAKNGII 188
           +  G ++A  ++  PF++RT + V     ++ E  + SLG+ ++ +   V++P     ++
Sbjct: 158 SEIGVVIALTYIGLPFVVRTVQPVLADFSKELEEASASLGASRFTTIKRVILPAVLPALL 217

Query: 189 AGAILAWARSIGEFGATMMLAGATKMKTETLPIAVFLNISLGDLEKALAVSLIFLLVATL 248
            G  LA+AR++GE+G+ + ++G    +TE  P+ +       D   A A+ ++ L  A +
Sbjct: 218 TGYALAFARAVGEYGSVIFISGNLPYRTEITPLLIVSKAEQYDYNGAAAIGVVMLAAAFI 277

Query: 249 VLVIIRSV 256
           +L+II S+
Sbjct: 278 LLLIINSL 285