Pairwise Alignments

Query, 266 a.a., ABC transporter permease from Methanococcus maripaludis S2

Subject, 281 a.a., sulfate ABC transporter, permease protein (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  125 bits (313), Expect = 1e-33
 Identities = 74/261 (28%), Positives = 138/261 (52%), Gaps = 9/261 (3%)

Query: 1   MKNNDFLKFFSLFALSVFILFILMIVMSIVTNISFET-------FYDSLFSKEIQFAIKL 53
           +++   L  FS+ +L V +LF+ +I++   T +  +T       ++  +    +  + K+
Sbjct: 8   LRHKRVLPGFSI-SLGVSLLFVSLILLLPTTGLIMQTSQMSWSEYWGVIADPRVLASYKV 66

Query: 54  SLETASIATILGTLLGVPAAYALARYNFKGKDIVDSIVELPVILPPLITGFALLVFFG-N 112
           ++ +A  A+I   L G+  A+ L RY F GK I+D++V+LP  LP  + G  L   +  N
Sbjct: 67  TILSALAASIFNCLFGLLLAWVLVRYEFPGKRILDALVDLPFALPTAVAGITLATLYAEN 126

Query: 113 TVFGKFITENIIEILFTYKGTIVAQFFVATPFIIRTSKSVFECIDEKYELIAQSLGSKKY 172
              G  + E  I++ +T  G +VA  F + PF++RT + V E +  + E    +LG+   
Sbjct: 127 GQIGSLLAELGIKVAYTPLGIVVAMIFTSIPFVVRTVQPVLEELSHEEEEAGMTLGATDA 186

Query: 173 ESFLDVVIPMAKNGIIAGAILAWARSIGEFGATMMLAGATKMKTETLPIAVFLNISLGDL 232
             F  V++P     ++ G  L++ RS+GEFGA + +AG     +E   + +F+ +   D 
Sbjct: 187 AVFWRVILPSLWPALMVGTALSFTRSLGEFGAVIFIAGNMPYISEITSLMIFVRLQEFDF 246

Query: 233 EKALAVSLIFLLVATLVLVII 253
             A A++ I L+ + L+L++I
Sbjct: 247 AGASAIASIVLMTSLLLLLLI 267