Pairwise Alignments

Query, 343 a.a., ATP-binding cassette domain-containing protein from Methanococcus maripaludis S2

Subject, 353 a.a., ATP-binding cassette domain-containing protein from Methanococcus maripaludis JJ

 Score =  202 bits (513), Expect = 1e-56
 Identities = 128/336 (38%), Positives = 190/336 (56%), Gaps = 19/336 (5%)

Query: 4   IENLRKNLSNFELYIEKLEVKNSDYFVFLGLSGSGKTTILEMIAGFIKPDSGKIMLNGVD 63
           IENL  NL  F+L    L V+  DY   +G +GSGK+ +LE   GF  P++GKI L   +
Sbjct: 6   IENLNINLGEFKLEDVNLSVEKGDYVTIIGPTGSGKSILLETALGFYTPETGKIFLEEKE 65

Query: 64  ITNKPINERKIVLCNGKY-LFPHLTIQKNIEYGIKHLKKPEK--KEKVDNISKLLNITHL 120
           ITN    +R I +    Y LFPH+T+ +NIEYG+K     +K  KE++  I+K+L I HL
Sbjct: 66  ITNLNPEKRDISIIYQDYALFPHMTVYENIEYGLKKRLNDKKAIKEEILQITKMLGIDHL 125

Query: 121 LNRKPERLSSGEQQRVALAMALVMEPEIILLDEPLSSLDRLLHEKLMYDLKEVHKSSNVT 180
           LNRKPE LS GE QR ++A  L+++P+I+ +DEP S+LD    EK+   +K   K    T
Sbjct: 126 LNRKPETLSGGEMQRASIARGLIIKPKILFMDEPFSALDVKTKEKIRILVKTAIKKYGTT 185

Query: 181 FIHVTHDFSEAAVLSNKMAILRNGKIEHIGTLQNVLKHPQNEFVAKFVGIKNILYGNCIE 240
            +HVTHDF +   L++K+ I++ G++   GT + V  +P +E VA FVG  NIL     E
Sbjct: 186 VLHVTHDFEDIWSLADKVLIMKGGRVYQYGTPEEVFSNPSSEIVADFVG-TNILDSKVEE 244

Query: 241 KDGNY-IIQLLGFEIPVKE-ANYGE-ITLGIFPKDIIVSKKSEKDS--KIYAGKIKSI-- 293
             GN  I+ + G +I   + A  GE + + I P++IIV+ K    S   ++ GK+  I  
Sbjct: 245 ISGNISILDVSGVKIYSSDIAKVGENVKVSIRPENIIVALKCFDSSAKNVFNGKVTEIKK 304

Query: 294 --------VPSGPFDSKAVIEFNNIELISEISNSDL 321
                   +  G  D K ++  N++E +    N +L
Sbjct: 305 RGHLVWLTLDIGGVDLKVLVTPNSLEALEIEENKNL 340