Pairwise Alignments

Query, 494 a.a., rubredoxin from Methanococcus maripaludis S2

Subject, 539 a.a., Ferredoxin-dependent glutamate synthase (EC 1.4.7.1) from Pseudomonas fluorescens FW300-N2E2

 Score =  142 bits (358), Expect = 3e-38
 Identities = 122/400 (30%), Positives = 180/400 (45%), Gaps = 28/400 (7%)

Query: 115 ESIIEPMRTKKPVISWESIFIKGAQLAKFPLNNDEEVITKTIIGPKAKHPLIIETPIF-I 173
           ES  +P  T   V      FI G  +   PL+ D      T+ GP+   P      +F I
Sbjct: 106 ESADKPFGTLIDVYQTGFEFI-GHSMRPAPLS-DPSGFRVTVGGPQCTQPY--SASVFNI 161

Query: 174 THMSYGALSKNVKIALSKGSAAVKTAMCSGEGGMLEESFENAYKYILE------------ 221
           + MS+G+LS N   AL++G+     A  +GEG +     E+      E            
Sbjct: 162 SAMSFGSLSANAIRALNQGAKLGNFAHDTGEGSISPYHREHGGDLTWELGSGYFGCRTSD 221

Query: 222 --YVPNQYSITDENLKKVDAVEIKIGQSSKPGMGGHLPAEKVSEEIAKLRGFKVGQDIVS 279
             + P +++   +N  +V  +EIK+ Q +KPG GG LP  KV+ EIA+ RG  +G+D VS
Sbjct: 222 GRFDPERFAAQAQN-PQVRMIEIKMSQGAKPGHGGILPKHKVTREIAETRGILMGEDCVS 280

Query: 280 PSKFHDINNKDDLKNKVSNLREKSGGKPIGIKIAAGDIEADLEVA-----TYAKPDFITI 334
           PS+    +   +L   V  LRE SGGKP+G K   G     + +A     T   PDFI +
Sbjct: 281 PSRHSAFSTPIELMQFVQQLRELSGGKPVGFKFCLGHPWEFMGIAKAMLETGILPDFIVV 340

Query: 335 DGRPGATAASPKFIKDSTSVPTIFALYRAREFFNKNGITD-ISLVITGGLRISSDFAKAI 393
           DG+ G T A+P    D   VP    L           + D I L  +G +  + D A  +
Sbjct: 341 DGKEGGTGAAPVEFTDHIGVPLREGLLFVHNTLVGLNLRDKIKLGASGKIVSAFDIASVL 400

Query: 394 AIGADAIAIGTAALMATACQQYRICDTGECPVGVTTQKPELKDRLKIELSAKKLSNYLRV 453
           AIGAD        + A  C Q + C T +CP GV TQ    +  L +   A+++ N+ R 
Sbjct: 401 AIGADWANAARGFMFAIGCIQSQSCHTNKCPTGVATQDTLRQRALVVPDKAQRVYNFHRN 460

Query: 454 STEELKTFARLTGNKNIHDLSVDDLC--TSDSEISNFTSI 491
           + + L       G ++   L    L    S +EI  F+ +
Sbjct: 461 TLKALAEMLAAAGLEHPSQLQPKHLVRRMSATEIKLFSQL 500