Pairwise Alignments

Query, 494 a.a., rubredoxin from Methanococcus maripaludis S2

Subject, 1487 a.a., glutamate synthase large subunit from Vibrio cholerae E7946 ATCC 55056

 Score =  132 bits (332), Expect = 9e-35
 Identities = 99/305 (32%), Positives = 145/305 (47%), Gaps = 12/305 (3%)

Query: 176  MSYGALSKNVKIALSKGSAAVKTAMCSGEGGMLEESFENAYKYILEYVPN-QYSITDENL 234
            MS GALS     AL+     +     SGEGG     F       ++ V + ++ +T   L
Sbjct: 864  MSIGALSPEAHEALATAMNRLGGYSNSGEGGEDPRRFGTERNSRIKQVASGRFGVTPHYL 923

Query: 235  KKVDAVEIKIGQSSKPGMGGHLPAEKVSEEIAKLRGFKVGQDIVSPSKFHDINNKDDLKN 294
               D ++IK+ Q +KPG GG LP  KV+ EIAKLR    G  ++SP   HDI + +DL  
Sbjct: 924  TNADVLQIKVAQGAKPGEGGQLPGHKVTAEIAKLRYSVPGVTLISPPPHHDIYSIEDLAQ 983

Query: 295  KVSNLREKSGGKPIGIKIAA----GDIEADLEVATYAKPDFITIDGRPGATAASPKFIKD 350
             + +L++ +    + +K+ +    G I   +  A YA  D ITI G  G TAASP     
Sbjct: 984  LIFDLKQINPKALVSVKLVSEPGVGTIATGVAKA-YA--DLITISGYDGGTAASPLTSVK 1040

Query: 351  STSVPTIFALYRAREFFNKNGIT-DISLVITGGLRISSDFAKAIAIGADAIAIGTAALMA 409
                P    L   ++    NG+   I L + GGL+   D  K   +GA++   GTA ++A
Sbjct: 1041 YAGSPWELGLAETQQALVANGLRHKIRLQVDGGLKTGLDVIKGAILGAESFGFGTAPMVA 1100

Query: 410  TACQQYRICDTGECPVGVTTQKPEL-KDRLKIELSAKKLSNYLRVSTEELKTFARLTGNK 468
              C+  RIC    C  GV TQ   L KD  K     + + NY +   EE++ +    G +
Sbjct: 1101 MGCKFLRICHLNNCATGVATQDETLRKDYFK--GLPEMVMNYFKGLAEEVRGYLAELGVE 1158

Query: 469  NIHDL 473
             + DL
Sbjct: 1159 KLTDL 1163