Pairwise Alignments

Query, 494 a.a., rubredoxin from Methanococcus maripaludis S2

Subject, 548 a.a., glutamate synthase domain-containing protein (RefSeq) from Shewanella amazonensis SB2B

 Score =  134 bits (337), Expect = 8e-36
 Identities = 89/299 (29%), Positives = 139/299 (46%), Gaps = 23/299 (7%)

Query: 173 ITHMSYGALSKNVKIALSKGSAAVKTAMCSGEGGMLEESFENAYKYILEYVPNQYSITDE 232
           I+ MS+G+LS N   AL+ G+        +GEGG+ +   E+    + +     +     
Sbjct: 160 ISAMSFGSLSSNAIQALNLGAKKGGFYHNTGEGGISDHHLEHGGDLVWQIGSGLFGCRTH 219

Query: 233 N-------------LKKVDAVEIKIGQSSKPGMGGHLPAEKVSEEIAKLRGFKVGQDIVS 279
                         L +V  +EIK+ Q +KPG GG LP  K++EEIA++R     +D VS
Sbjct: 220 EGAFDPEAFRRQACLPQVKMIEIKLSQGAKPGHGGVLPKAKITEEIARIRLIPTDRDCVS 279

Query: 280 PSKFHDINNKDDLKNKVSNLREKSGGKPIGIKIAAGDI-------EADLEVATYAKPDFI 332
           P+          L   +  LR  SGGKP+G K+  G+        +A LE   Y  PDFI
Sbjct: 280 PAVHPMCATPKALLGFIRELRTLSGGKPVGFKLCIGNPAEFLAIGKAMLETGIY--PDFI 337

Query: 333 TIDGRPGATAASPKFIKDSTSVPTIFALYRAREFFNKNGITDISLVITGGLRISS-DFAK 391
           T+DG  G T A+P    +   +  +  +Y         G+ D   +I  G   S+ D   
Sbjct: 338 TVDGAEGGTGAAPVEFTNRMGMVCLEGVYFVHNALIGLGLRDKVRIIASGKTASAFDLLS 397

Query: 392 AIAIGADAIAIGTAALMATACQQYRICDTGECPVGVTTQKPELKDRLKIELSAKKLSNY 450
            +A+GAD +      ++A  C Q R C+T  CP G+ TQ P     + +E+ + ++ N+
Sbjct: 398 KLALGADTVNAARTMMLALGCIQSRHCNTNNCPTGIATQDPVRGKAVDVEVKSDRVKNF 456