Pairwise Alignments

Query, 494 a.a., rubredoxin from Methanococcus maripaludis S2

Subject, 516 a.a., ferredoxin-dependent glutamate synthase (RefSeq) from Shewanella loihica PV-4

 Score =  315 bits (806), Expect = 3e-90
 Identities = 157/366 (42%), Positives = 231/366 (63%), Gaps = 1/366 (0%)

Query: 129 SWESIFIKGAQLAKFPLNNDEEVITKTIIGPKAKHPLIIETPIFITHMSYGALSKNVKIA 188
           SW+ I I  AQ+A  PL  +E V T+ IIGP+A+ PL ++ P+ ++ MS+GALS+  K+A
Sbjct: 145 SWDEIQIMTAQMANKPLFEEEAVDTELIIGPEARKPLRLKIPLLVSDMSFGALSEEAKVA 204

Query: 189 LSKGSAAVKTAMCSGEGGMLEESFENAYKYILEYVPNQYSITDENLKKVDAVEIKIGQSS 248
           L+KG+    T +CSGEGGML E      +Y  E    Q+   +  + K+ A   K GQ +
Sbjct: 205 LAKGAELAGTGICSGEGGMLPEEQAANSRYFYELASAQFGYQEALMAKIQAFHFKGGQGA 264

Query: 249 KPGMGGHLPAEKVSEEIAKLRGFKVGQDIVSPSKFHDINNKDDLKNKVSNLREKSGGKPI 308
           K G GGHLP  K   +IA++RG   GQD +SP +F ++N+  D K     +RE SGG PI
Sbjct: 265 KTGTGGHLPGSKNQGKIAQIRGIPAGQDAISPPRFRELNSVADFKRFADRVRELSGGVPI 324

Query: 309 GIKIAAGDIEADLEVATYAKPDFITIDGRPGATAASPKFIKDSTSVPTIFALYRAREFFN 368
           G K++A  IE D++ A  A  D+I +DGR G T A+P+  +D  SVPTI AL RAR + +
Sbjct: 325 GFKLSANHIERDIQFALDASADYIILDGRGGGTGAAPQIFRDHISVPTIPALARARRYLD 384

Query: 369 KNGITD-ISLVITGGLRISSDFAKAIAIGADAIAIGTAALMATACQQYRICDTGECPVGV 427
           + G +  ++L+ITGGLR+  DF KA+A+GAD +A+  +A+ A  C   RIC+T  CP G+
Sbjct: 385 QQGASGRVTLIITGGLRLPMDFVKAMALGADGVALANSAMQAIGCVAARICNTNNCPAGI 444

Query: 428 TTQKPELKDRLKIELSAKKLSNYLRVSTEELKTFARLTGNKNIHDLSVDDLCTSDSEISN 487
            TQ  +L+ RL I+ SA++L+N+L  STE ++  AR  G+  + D ++DDL T  SE++ 
Sbjct: 445 ATQNADLRQRLNIDKSAQQLANFLGASTELMQVMARACGHHRLQDFTLDDLATWHSEMAR 504

Query: 488 FTSIKH 493
            + I +
Sbjct: 505 LSGISY 510