Pairwise Alignments

Query, 494 a.a., rubredoxin from Methanococcus maripaludis S2

Subject, 544 a.a., ferredoxin-dependent glutamate synthase (RefSeq) from Desulfovibrio vulgaris Miyazaki F

 Score = 97.4 bits (241), Expect = 1e-24
 Identities = 96/355 (27%), Positives = 155/355 (43%), Gaps = 30/355 (8%)

Query: 170 PIFITHMSYGALSKNVKIALSKGSA------AVKTAMCSGEGGMLEESFENAY-KYILEY 222
           P+ I  MS+GALS N+   L  G A       +   MC+GEGG       + + KY++  
Sbjct: 189 PLVIGSMSFGALSPNMWEGLQMGVAYLNEEMGMPVRMCTGEGGCPPRLLRSRFLKYVILQ 248

Query: 223 VPNQYSITDENLKKVD-------AVEIKIGQSSKPGMGGHLPAEKVSEEIAKLRGFKVGQ 275
           + + Y   DE L  +        A+EIK GQ +KPG GG L   KV++ IA +RG   G 
Sbjct: 249 IASGYFGWDEILHAIPQMKEDPCAIEIKYGQGAKPGDGGLLMWHKVNKLIASIRGVPPGV 308

Query: 276 DIVSPSKFHDINNKDDLKNKVSNLREKSGG--KPIGIKIAAGDIEADLEVATYAKP--DF 331
            + SP       + ++   K+      + G   P+  KI+A      +       P    
Sbjct: 309 SLPSPPTHQTQYSIEESVAKMIQSMSMAWGFRVPVYPKISATTTSRAVLNNLVRNPYAAG 368

Query: 332 ITIDGRPGATAASPKFIKDSTSVPTIFALYRAREFFNKNGI-TDISLVITGGL----RIS 386
           + IDG  G T A+     +    P    +        + G   +I L+  GG+     ++
Sbjct: 369 LAIDGEDGGTGAAYNVSMNHMGHPIASNIRDCYHDLVQQGCQNEIPLIAGGGIGKNGNLA 428

Query: 387 SDFAKAIAIGADAIAIGTAALMATA------CQQYRICDTGECPVGVTTQKPELKDRLKI 440
            + A  I +GA  + +G   + A A        +  IC+ G CP G+T+Q P +  RL  
Sbjct: 429 HNAAALIMLGASMVQVGKYVMQAGAGCVGSEIDRCNICNLGRCPKGITSQDPRVYRRLDP 488

Query: 441 ELSAKKLSN-YLRVSTEELKTFARLTGNKNIHDLSVDDLCTSDSEISNFTSIKHV 494
           E  A+++ + YL   TE  K FA L  + ++     D L  ++ + +    I++V
Sbjct: 489 EKVAERVVDFYLAFDTELRKIFAPLGRSTSLPVGMSDALGIANKDAAERLGIQYV 543