Pairwise Alignments

Query, 494 a.a., rubredoxin from Methanococcus maripaludis S2

Subject, 496 a.a., glutamate synthase, putative (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  154 bits (390), Expect = 5e-42
 Identities = 107/344 (31%), Positives = 166/344 (48%), Gaps = 22/344 (6%)

Query: 144 PLNNDEEVITKTIIGPKAKHPLIIETPIFITHMSYGALSKNVKIALSKGSAAVKTAMCSG 203
           P + D   I    IGP  + P        I+ MS+GALS+    ALS G+A     + +G
Sbjct: 121 PQDEDITPIQPLTIGPHCRVPYTTSAICHISAMSFGALSRPAVTALSHGAAQAGCWLNTG 180

Query: 204 EGGMLEESFENAYKYILEYVPNQYSITDEN-------------LKKVDAVEIKIGQSSKP 250
           EGG+     +     + +    +Y + +E+               +V   EIK+ Q +KP
Sbjct: 181 EGGLSPYHLKGGCDLVFQIGTAKYGVRNEHGHLDDDKLTAIAAHPEVKMFEIKMSQGAKP 240

Query: 251 GMGGHLPAEKVSEEIAKLRGFKVGQDIVSPSKFHDINNKDDLKNKVSNLREKSGGKPIGI 310
           G GG LP  KV+EEIA +RG  +GQD +SP+   + NN  D+ + ++ +RE + GKP GI
Sbjct: 241 GKGGILPGVKVTEEIAHIRGIPLGQDSISPNGHIEFNNVGDILDMIARVREVT-GKPTGI 299

Query: 311 KIAAGDIE------ADLEVATYAK-PDFITIDGRPGATAASPKFIKDSTSVPTIFALYRA 363
           K   GD++       ++E    A  PDF T+D   G T A+P+ + D   +P   +L   
Sbjct: 300 KAVLGDVQWLEDFCNEIERRGEASAPDFFTLDSADGGTGAAPQPLMDYVGLPLKESLPIL 359

Query: 364 REFFNKNGI-TDISLVITGGLRISSDFAKAIAIGADAIAIGTAALMATACQQYRICDTGE 422
                K+G+   I ++ +G L + S  A A+A+GAD IA     + A  C Q   C+   
Sbjct: 360 VNILIKHGLGKRIKVIASGKLIVPSRVAWALALGADFIASARGNMFALGCIQALQCNKDT 419

Query: 423 CPVGVTTQKPELKDRLKIELSAKKLSNYLRVSTEELKTFARLTG 466
           CP G+TT   +L+  L     + +++NY      +L   A   G
Sbjct: 420 CPTGITTHNKKLQHGLDPRDKSTRVANYNHNLHHDLALIAHSCG 463