Pairwise Alignments

Query, 494 a.a., rubredoxin from Methanococcus maripaludis S2

Subject, 1482 a.a., glutamate synthase subunit alpha (RefSeq) from Shewanella sp. ANA-3

 Score =  135 bits (340), Expect = 1e-35
 Identities = 96/304 (31%), Positives = 143/304 (47%), Gaps = 10/304 (3%)

Query: 176  MSYGALSKNVKIALSKGSAAVKTAMCSGEGGMLEESFENAYKYILEYVPN-QYSITDENL 234
            MS GALS     AL+     +     SGEGG     F       ++ + + ++ +T   L
Sbjct: 862  MSIGALSPEAHEALAIAMNRLGGRSNSGEGGEDARRFNTERNSAIKQIASARFGVTAHYL 921

Query: 235  KKVDAVEIKIGQSSKPGMGGHLPAEKVSEEIAKLRGFKVGQDIVSPSKFHDINNKDDLKN 294
               D ++IK+ Q +KPG GG LP  KVS EIA LR  + G  ++SP   HDI + +DL  
Sbjct: 922  VNADVLQIKVAQGAKPGEGGQLPGHKVSVEIAGLRHARPGVTLISPPPHHDIYSIEDLAQ 981

Query: 295  KVSNLREKSGGKPIGIKIAA----GDIEADLEVATYAKPDFITIDGRPGATAASPKFIKD 350
             + +L++ +    I +K+ +    G I   +  A YA  D ITI G  G T ASP     
Sbjct: 982  LIFDLKQINTKALISVKLVSEPGVGTIATGVAKA-YA--DMITISGYDGGTGASPITSVK 1038

Query: 351  STSVPTIFALYRAREFFNKNGIT-DISLVITGGLRISSDFAKAIAIGADAIAIGTAALMA 409
                P    L    +   +NG+   I L + GGL+  +D  KA  +GA++   GT  ++A
Sbjct: 1039 YAGSPWELGLAEVHQSLVENGLRHKIRLQVDGGLKTGTDVIKAALLGAESFGFGTVPMIA 1098

Query: 410  TACQQYRICDTGECPVGVTTQKPELKDRLKIELSAKKLSNYLRVSTEELKTFARLTGNKN 469
              C+  RIC    C  GV TQ  +L+D     L  +++  Y     EE++ +    G   
Sbjct: 1099 LGCKYLRICHLNNCATGVATQDKKLRDNHYHGL-PERVMTYFEFVAEEVREWMATLGVSK 1157

Query: 470  IHDL 473
              DL
Sbjct: 1158 FEDL 1161