Pairwise Alignments

Query, 759 a.a., DEAD/DEAH box helicase from Methanococcus maripaludis S2

Subject, 1438 a.a., DNA repair helicase Lhr (from data) from Pseudomonas fluorescens FW300-N2E3

 Score = 95.1 bits (235), Expect = 2e-23
 Identities = 93/350 (26%), Positives = 162/350 (46%), Gaps = 37/350 (10%)

Query: 65  QYSALENVRIGKNILLTTSTASGKTLSFNLPILETLQND---------KDATALYIYPTK 115
           Q  A   +R  ++ L+   T SGKTL+  L +++ L +           +   +Y+ P K
Sbjct: 33  QAGAWPLIRQRRSTLVAAPTGSGKTLTAFLAVIDDLVHQGLAHGGELPDETLVVYVSPLK 92

Query: 116 ALTNDQLNNLKN----LENELNITLKPEIY------DGDTPNSKRKSIREKS-RIILTNP 164
           AL+ND   NL+     +  +L     PE+        GDTP   R ++R+ +  I++T P
Sbjct: 93  ALSNDIQINLQTPLAGITEQLRELGFPELQINTAVRTGDTPQKDRSAMRKSAPHILVTTP 152

Query: 165 HELHQVLQYNPKWMSFFKNLKYIVIDEAHTYRGIF-GSNISFLIRRLRRICEDYGSYPQF 223
             L+ VL  +        + + +++DE H   G   GS+++  + RL+ +C +    P  
Sbjct: 153 ESLY-VLLGSDSGRRMLASTRTVIVDEIHAIAGSKRGSHLALSLERLQALCCE----PLM 207

Query: 224 ILA-SATLANAKEFSEKLVGLD--FRVIDKDGSPKNKKYFVFYNT--LKNEISESSWYSS 278
            +  SAT    +  S  LVG      +ID  G  + +   +      L   ++   W   
Sbjct: 208 RIGLSATQKPIEAVSRFLVGTGRPCEIIDI-GHARRRDLGIEVPPVPLSAVMANDVWELV 266

Query: 279 AINILELCMKYGLQTIGFTLSRKMAELITIWTKKSLGNNILSRKISSYRSGFTPEERRDI 338
              I EL  ++   T+ F  +R++AE ++    + LG +     ++++      E R D 
Sbjct: 267 YDRIAELAREHRT-TLIFVNTRRLAERLSRHLSERLGKDA----VAAHHGSLAKEFRLDA 321

Query: 339 ESRLKNGDLRAVTSTNALEVGIDIGSLDSVIMYGYPGTLMSLWQQAGRAG 388
           E RLK GDL+ + +T +LE+GIDIG +D V     P ++    Q+ GR+G
Sbjct: 322 EQRLKRGDLQVLIATASLELGIDIGDVDLVCQIASPRSIAGFLQRVGRSG 371